GABI DUPLOdb - pair details


Details for pair 1187
  
  Pair Info Parent 1 Parent 2
Pair ID 1187    
Parent loci   At1g51880 [Araport] [TAIR] At3g21340 [Araport] [TAIR]
Gene Annotations   root hair specific 6 Leucine-rich repeat protein kinase family protein;
Pair-related paper(s)  
Similarity (TAIRv10) 68.2 %    
Gap (TAIRv10) 4.7 %    
Component 41    
Genetically unlinked Yes    
Assigned allele   854B04 / At1g51880 031E02 / At3g21340
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At1g51880 Graphic view of gene At3g21340
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 1187/1a1.01.29
NASC set ID N2102810
Assigned allele   854B04 031E02
Allele genotype in parent1   Het  
Allele genotype in parent2     Het
Allele genotype in DM1   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because another close protein-coding homolog exists.
(At1g51880, At3g21340, At1g51910, At1g51860, At1g51790, At1g51800, At1g51890, At2g19190, At3g46350, At4g29990, At5g59650, At1g05700, At1g49100, At2g19210, At2g29000, At5g16900, At1g51820, At2g28990, At2g14440, At1g51850, At3g46330, At2g28960, At2g28970, At5g59680, At1g07560, At1g51805, At3g46340, At2g14510, At3g46420, At1g07550, At2g04300, At5g59670, At1g51870, At3g46400, At4g20450, At1g51810, At3g46370, At2g19230, At4g29450, At1g51830, At4g29180)

 

Last Updated on Thursday, 06 December 2018 16:11