Sequences from confirmation amplicon


Confirmation sequences for line 319C08 and hit At2g38490 are shown.
Line ID 319C08
Locus At2g38490 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:16115069
Primers used for PCR JK08 - 8474, show primer details
   
Sequence Name 41-K020436-022-319-C08C-8409
GenBank Accession LN503917 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>41-K020436-022-319-C08C-8409
CATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAAACGCCGCTTG
GTAGACTTTGGCAAACGCGCCGCTACCGAGGAGCTTACCGAGATCGTACTTACCGAACAA
AGCCGACTTATTATCATCTCCGGTGACGTTAACAATGATTGATTCGGAAGAATTAGAGTC
TTCGGCCATTAACAAACAAACAAAAAAAACAGAGCAAAAAAACAGAGTAAAGAGAAACAG
TCTAGGAATTGTAAAAGACATGCGCGCGGTGCCTCTTCTTATTGAAATTCCTCAACTTGC
CACGTAAGTAAGCTATTATTTTAAACAAAGATTTTAAAATAGTTTGACTTTATTATAAAA
TGCATTAAACAAATAAATGAAAGAAACAATCTTCACAAAAGACAATTTCAAAATGCGATA
ACATTTTCGATTTTTACTAATTTGAATTAGTTGCGATATATCAACCAGGTTAGAGATAGA
GTCATTTTCTCCTGAAATAATTTACGATTCAAGGAATTTTCATGATTCTTTCCCCAATGT
GTGGTTCATGTTGTTGTTACCAAACATCTGCCTTGTCAGGTCAACCAAAACCTT
   
Sequence Name 42-K020436-022-319-C08C-JK08
GenBank Accession LN504306 [GenBank]
Sequencing primer gene specific primer, JK08: 5'-ACCTGGAATTAGAAGGTTTTGGTT-3'
Sequence (A. th genome BLAST matches underlined) 
>42-K020436-022-319-C08C-JK08
CTGACAGGCAGATGTTTGGTAACAACAACATGAACCACACATTGGGGAAAGAATCATGAA
AATTCCTTGAATCGTAAATTATTTCAGGAGAAAATGACTCTATCTCTAACCTGGTTGATA
TATCGCAACTAATTCAAATTAGTAAAAATCGAAAATGTTATCGCATTTTGAAATTGTCTT
TTGTGAAGATTGTTTCTTTCATTTATTTGTTTAATGCATTTTATAATAAAGTCAAACTAT
TTTAAAATCTTTGTTTAAAATAATAGCTTACTTACGTGGCAAGTTGAGGAATTTCAATAA
GAAGAGGCACCGCGCGCATGTCTTTTACAATTCCTAGACTGTTTCTCTTTACTCTGTTTT
TTTGCTCTGTTTTTTTTGTTTGTTTGTTAATGGCCGAAGACTCTAATTCTTCCGAATCAA
TCATTGTTAACGTCACCGGAGATGATAATAAGTCGGCTTTGTTCGGTAAGTACGATCTCG
GTAAGCTCCTCGGTAGCGGCGCGTTTGCCAAAGTCTACCAAGCGGCGTTTCAGGATATAT
TCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGT
TCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATG
TCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAA

Last Updated on 06.12.2018 16:11