SimpleSearch - Line and FST details
Line specific information
| Line ID | 015E12 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N401404) |
| Segregation Analysis | 50:49:42 |
| Confirmed for Hit | At3g03250 |
| Parent of DUPLO pair | 2528 |
| Parent of pair(s) | none |
Gene hit At3g03250
| Sequence (A. th genome BLAST matches underlined) | >01-K017011-022-015-E12T-8409 TGATCCTGAAGTTTGAGCACCAATTCAGTGTAGCCCATTACCTTACATAATTCACTCAAA TGCTATGGGATCCTCCCTATAGTGAGATTCACACATAATCAAACGGTCAACCATAATTGT GGCGAAAAAGAAAACATCCGGAGTTTGAACATAACCATGATTCGTTACATTACCTTGTTC TCGACCACGGCCCTGTCCGGAATTTCAAGCTTCACACCGGATTTTGCCGCCACAGTCACC TTGCCCTTTAAATCCAAAAGAAACCATTCTGAGCATATATAAATATCAACACCACCTTGT GAACTAATGAACAATTTACATATATACCTTGAGAACAATGGAAGAGCCAAACCAGACATC ACCAGACACCTTAAGGCTGTCGAGCTCGACTATGCTATGGGATCCTCCCTTATAGTGAGA NANACGACCTGTCGCACAAGNCCTAAAGTACTCGACAGGCTGCCGACCTGCCCCTTTCCT GGCGTATACTGGACGCGTGTTTTAGTAGCATAAAGTAAAATACTTGCTGACTACAACCGC AGACATTACCCCCATGAACAAGAGCACCGTCGCAGAGCCTGCTGAGCTATTGCCTCGGTT AGCTCCGACGACCGGGACTTGACCAACCAAAGGGATCAAAGTGCAAACGGCCGGCTAGCC CACGGCTGGTATCCCAAAATAACCCCGGGACCGGGCGCCAACCGCCCGGGAGATTGCCAG GATGC |
| GenBank Accession | AL935994 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:749998 - go to primer design |
| BLAST e Value | 1e-170 |
| Hit Clone Code (BAC ID) | T17B22 |
| Hit Gene Code | At3g03250 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-GLUCOSE PYROPHOSPHORYLASE 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL935995 [GenBank] AL935995 [GenBank] BX284991 [GenBank] |
Gene hit T5K6
| Sequence (A. th genome BLAST matches underlined) | >93-K013041-022-015-E12-35St ATTTCATTTGGAGAGGACAGGGCGCCCGGGGATCAGAATGTCGTTTCCCGCCTTCGGTTG AGCGGATGGTCCTTACTCCATCGTGTTTTGCCAAAAGTCGGTGTGACATGAGAAAAAATG TAACCTTGCATACGTGCCACACGAGCATTTTTGTAACAATACGTGCGATCATAGGGTGGA AGATTTGATAGAACACTCACTGACTATGGGATCCTTCCTATAGTGAGTCGCATCACTCAC CCCCCCCCCCGCCCCCTTTATTTGCCTCCCCTTGTCCAATAACAACAGTTAAACAGCAGG CCGCCCCCCAACTACCATGTCCACGCATCCTACTGATAAAAAACACAGAAACGCCGCCCC GCTTTATTCTCCCCCCAAAAAATTTAAATATTGTTCT |
| GenBank Accession | AL752596 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:3528869 - go to primer design |
| BLAST e Value | 8e-27 |
| Hit Clone Code (BAC ID) | T5K6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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