SimpleSearch - Line and FST details


Line specific information

 
Line ID 089H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N408542)
Segregation Analysis 50:48:34
Confirmed for Hit At3g26060
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g28450

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016187-022-089-H10-8409
CTGTGTATCTAGCATCTATTCGTCTTGCTAATATTTATATCGTAATACTCGAAATACATA
TCAAATAGATAATGGAACAGAACTTAGATTGTCCAAAAAACCTTGGTCTAACAAAGAAGC
TAATTCCCAGAACTATGGGATCCTCCCTATAGTGAGAGCATCAGCAAATGCTAGGGAAGA
ATATATAACATTGATAAAACCTATCAGCCAACGCCTCATTTTCTCTGCACAACACCATGT
TTTGATTGTGCCTCATGTATATCAACTGAACTCAAACCGTATGATAATGCTATGATGCCC
TCACTATAACGAGAGGCTCAATAGTTCTCCAGAGCAAGATCATGACCGCATATTTTAGGG
TAAAAAAGAAGAAGCATATTCCTACAAGCAACTCTGGACCAGTCATACAATCTTCATCAT
CTAAATCAAAGACCTTCACGGTAGAAAAATCAGAACCCAACACTCTCAGGGGTTAACCTC
CATAAACATACTAAAAGATCACTGATCACCACCAACATTGATCAGTTCATACTCAACGAG
AGACAGATTGTTATCCTCCTTGACAGTGAAAGACGCGGCTCCAGTGGCTTCGATGCGTCC
CCATTTATCAACTCCTATGGGAT
GenBank Accession AL937896 [GenBank]
Graphic View Graphic view of gene At4g28450
Predicted Position of Insertion Chr4:14061418 - go to primer design
BLAST e Value 3e-171
Hit Clone Code (BAC ID) F20O9
Hit Gene Code At4g28450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WD repeat and SOF domain-containing protein 1
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At3g26060

 
Sequence (A. th genome BLAST matches underlined) 
>80-K016186-022-089-H10-8409
GATCCTGTAGATTTCCCGGACATGAAGCCATATCGGGTTTTAAGTCTGAATTTAAATGTT
ATAAGAACAGATTTATGAATGTGTTAGTGCAGAATCAAAGACAAAATCAAAGAAACTTGT
AATCAGTGTTTGTTTTAGAGACCATAAACTTTCACATACCTGAAAATAAGCAAATGCTAT
GGGATCCTCCCCTATAGTGAG
GenBank Accession AL937895 [GenBank]
Graphic View Graphic view of gene At3g26060
Predicted Position of Insertion Chr3:9525228 - go to primer design
BLAST e Value 6e-77
Hit Clone Code (BAC ID) MPE11
Hit Gene Code At3g26060 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Thioredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37