SimpleSearch - Line and FST details


Line specific information

 
Line ID 090B02
Vector Used pAC161
Line Availability available as T3 set from NASC (N408558)
Segregation Analysis 50:47:45
Confirmed for Hit At4g11480
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g09560

 
Sequence (A. th genome BLAST matches underlined) 
>10-011957-strizhov-B2-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTCACGACTTGAATATATCCTCGTAC
TAAGAGTGATGTCATCGACTAGGCCCTTAAAACTTTGTGGACCGGTGATTACACTCGGGA
ATGTTGATAGCTCATCAAAACTTTATGTATGGGATCCTGCCTATAGTGAAGCAAAGAAAC
ATAACATATACTCGCTTACGAATCCGTTCCCAACAAAAGCCTTAATTATTTTCCTCTTTG
GTAATAAACAAAAACACTTACTTGGTTTAATTATGTGCATTTTACCAAATGTTTTTAAAA
ATATTTGTCTTATGCAGATCCAACCAAGAAGAGTCAGCTATGGGATCCTCCCTATAGTGA
GTCGATTTACTCAACATTATATATTAACACGCTCGTTCATGCCTCACCGTTAATCTGCAA
CGTCCGCGTTTCAGGGTTAGTTCTTCTCACGCGAATCGTGAAGCGCGTGAAGCTACGCGT
TGTCTTTAATGGGTTGGGTTTAGGGGATAATAACCCGATACCCGTGGTTTGGGCT
GenBank Accession AL769632 [GenBank]
Graphic View Graphic view of gene At1g09560
Predicted Position of Insertion Chr1:3093774 - go to primer design
BLAST e Value 6e-74
Hit Clone Code (BAC ID) F14J9
Hit Gene Code At1g09560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation germin-like protein 5
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At4g11480

 
Sequence (A. th genome BLAST matches underlined) 
>10-011957-strizhov-B2-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTCACGACTTGAATATATCCTCGTAC
TAAGAGTGATGTCATCGACTAGGCCCTTAAAACTTTGTGGACCGGTGATTACACTCGGGA
ATGTTGATAGCTCATCAAAACTTTATGTATGGGATCCTGCCTATAGTGAAGCAAAGAAAC
ATAACATATACTCGCTTACGAATCCGTTCCCAACAAAAGCCTTAATTATTTTCCTCTTTG
GTAATAAACAAAAACACTTACTTGGTTTAATTATGTGCATTTTACCAAATGTTTTTAAAA
ATATTTGTCTTATGCAGATCCAACCAAGAAGAGTCAGCTATGGGATCCTCCCTATAGTGA
GTCGATTTACTCAACATTATATATTAACACGCTCGTTCATGCCTCACCGTTAATCTGCAA
CGTCCGCGTTTCAGGGTTAGTTCTTCTCACGCGAATCGTGAAGCGCGTGAAGCTACGCGT
TGTCTTTAATGGGTTGGGTTTAGGGGATAATAACCCGATACCCGTGGTTTGGGCT
GenBank Accession AL769632 [GenBank]
Graphic View Graphic view of gene At4g11480
Predicted Position of Insertion Chr4:6972667 - go to primer design
BLAST e Value 3e-63
Hit Clone Code (BAC ID) F25E4
Hit Gene Code At4g11480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cysteine-rich RLK (RECEPTOR-like protein kinase) 32
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37