SimpleSearch - Line and FST details


Line specific information

 
Line ID 127H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N412182)
Segregation Analysis 102:102:77
Confirmed for Hit At2g31960
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g31960

 
Sequence (A. th genome BLAST matches underlined) 
>16-K012670-022-127-H2-8409
CCTGATCCATGTAGATTTCCCGGACCTGGTGTCTTACTATTTGATTTTGTTTCGGTGCGG
CTTATCTTGCTTCTGTAAGTATTCGACATATGTGAACACCCGTTGCGCTGATCTGGTCCG
GCGAGGTGAACATCTCTTGAATGCATGGGGGGTCTTGCGAATGATAAAGAGATAGGGCCC
TGACCCTGACGTTGGTGGCAAATACTATCAATCCACTTGCTCGCTAGACGTGGAACGCCA
CACGAGGAATATACCCGCTACGCCCGTAGGGGGTGAGGCGACAACTACGCCGGCTCAATT
CGATTCTGTGTATAAACCGGTCTCTCGCGATTCAATCCGTCTTGGTTTTCCAATGGACCA
GCTCCTTCTTCTTCCATTGTCGAGTTTACATGATCTTCCCGCAGAACCCTGCTCGTCTAT
GGGGTTAACCTTCCTGTGCCACCAAAATTTTCTCCGAAACTGATCACCTCCACTTTTTCA
TATCTGTAATCGCTGAAGGTGAAAGATGAGTACGGTCGATAAAATGTTGATCAAGGGTAT
AAGAATCTTCGACCCTAAAAATAAGAACGCTTGTTCTTTCTTCAGACCTTTAACCCTAAT
CGTCGGCGCTTACCGGACCCGGAAAAACTTGTAAGATTCCTTAAACCTTTTCTCTTCTTC
TCAGTTCACTCCCATTTCTTCGCCTCCGTAATTGAAAAAGTTGGGGGCTATTTCCGTGAT
TTTTGCAGACGATTATAAAGGTGTTTAAAGGTGCCTTGGACCCGAAAAATTGCCCCCCGA
ACGCCGAGGCCTGGTCATAACTTCATTATGAACCCTAAGGTAAGTCT
GenBank Accession BX572181 [GenBank]
Graphic View Graphic view of gene At2g31960
Predicted Position of Insertion Chr2:13600211 - go to primer design
BLAST e Value 7e-163
Hit Clone Code (BAC ID) F22D22
Hit Gene Code At2g31960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucan synthase-like 3
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37