SimpleSearch - Line and FST details
Line specific information
| Line ID | 196D03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N418759) |
| Segregation Analysis | 50:30:29 |
| Confirmed for Hit | At5g66340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g66340
| Sequence (A. th genome BLAST matches underlined) | >20-K114417-0022-196-D03-8409 CTCTCTTACTTTCCACATACTGACCTGCCCAGGCCGCTACTGATTAGTGTGAACCTATGA TATTGGAACCTTTGCTTGCAACAGCTGCACCTTCATTAGCCCATCAACCTTGCTTCCTGT AAGGCTATAATTACTTCTTCTATCTATGTCATCAACCAAGACTAACCTGCCCGGCCGCTA CNNNNNNNTGTCTCNCTGTTTCTCTGTGGGTCTTGTTCTCCNTGCCCGTCCCTGTCTTTG TTGGGGGGATGCACGCTCTACTCAGCGATTTCATCCTCCCCGGCCACTAAAAACACGTTN GNGCGGAGGAGTTGTAACCTTTGCTTGCATCAGNCTGCCATTCCTTAACCCATCCCCCTT GCTTCCTGTAAGGCGGGAATTACTTCCTCTATCTATGTCAGCTACCAAGAC |
| GenBank Accession | HE664310 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26502600 - go to primer design |
| BLAST e Value | 1e-45 |
| Hit Clone Code (BAC ID) | K1L20 |
| Hit Gene Code | At5g66340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL760333 [GenBank] |
Gene hit T1F9
| Sequence (A. th genome BLAST matches underlined) | >20-K114416-0022-196-D03-8409 GAATTTAGTCGCCATTTCAAAATGTACTTTCATTTTATAACCCCGCCGCGGACTTCTACA TCGTTGAGTTGGAAATCTATGGGAAGTTGCGCATCCCTTATGACATTTTAGTTCATTTTA GGAAAAGGTAAACTAATGTGGGTTAAATTCTAACCTGCCCGGCCGCTAGNNTNTTCCNTG TNGTTTNCCTTTCTTNTNGTTCTNNTNTGCGNTTTCCCCCTGGGGTTTCTCGCGTTGGNC TTCNTTTTTTTTNTTTGCCCTTTTTCGTTCCGGTTTTTTTTNTGGCCCCCCCCCCCGCCG GTGTTTTCGCTCTCTGTTGTTTCTTTGT |
| GenBank Accession | HE664309 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:22602911 - go to primer design |
| BLAST e Value | 4e-17 |
| Hit Clone Code (BAC ID) | T1F9 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | HE664309 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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