SimpleSearch - Line and FST details


Line specific information

 
Line ID 301C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N428830)
Segregation Analysis 50:30:24
Confirmed for Hit At2g47630
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g65260

 
Sequence (A. th genome BLAST matches underlined) 
>43-K114330-0022-301-C06-8409
ATCCTTAATTGAGCTTTCTTTTGACTTTGGCTCTTTCGCCTTTAGAGCTTTGCGCGATAA
ACATTTTCGAACCTAACCTGCCCGGTCCACTAAAATGTACTTTCATTTTATAATAACGCT
GCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCAT
ATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAA
TTGAATATATCCTTCATTGAGCTTTCTTTATGACTTTGGCTCTTTCGCCTTTTAGAACTT
TGCGCGTAAACATTTTCGAACCTAACCTGAACGG
GenBank Accession HE664482 [GenBank]
Graphic View Graphic view of gene At5g65260
Predicted Position of Insertion Chr5:26080672 - go to primer design
BLAST e Value 3e-35
Hit Clone Code (BAC ID) MQN23
Hit Gene Code At5g65260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g47630

 
Sequence (A. th genome BLAST matches underlined) 
>43-K114329-0022-301-C06-8409
TGACAATGAGAGACGCAGGGTCATCGGTTCGAAGGTCATGCCAATTGATGATGTCAGCAA
AAACAACGTCCACGTTACATTCATGCTCACCTGACGTCATACCGTGCCACATCCCTGGAT
ACCACTTGAGCGTCTTGTCCCTAGTGCTAACCTGCCCGGCCGCTAGNTTCANACCTCCNA
TGATCGTTACTCTTATCATCCCCGCCCGGCAGCTACAAGACGCTCGTAGTGTTACCACCT
CGTATAGGAGTGACACTGAGAGAGGCAGGGTCGTCGGTTCTAAGGTCGAGCCACTTGATG
ATGTCTTCAACAACAAGGTCGGCCTTGCACTCAGGCTCGCCTGACGTCCGAGC
GenBank Accession HE664481 [GenBank]
Graphic View Graphic view of gene At2g47630
Predicted Position of Insertion Chr2:19537017 - go to primer design
BLAST e Value 1e-52
Hit Clone Code (BAC ID) T30B22
Hit Gene Code At2g47630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE664481 [GenBank]


Last Updated on 10.06.2021 13:37