SimpleSearch - Line and FST details
Line specific information
| Line ID | 355H10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434078) |
| Segregation Analysis | 50:50:48 |
| Confirmed for Hit | At4g10180 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g10180
| Sequence (A. th genome BLAST matches underlined) | >80-K016870-022-355-H10-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATATGAAGCCATTTTCAATTGTAATT GTTGGTCTTCTGGGCCAACAAATGTTCACAAGCGGTAACGTCACCGCTCGGGTCTTCGAA CGTCAGATTCGAACTCCTCCTCCCGGCGCTTCCGTCAGTCCCCAAATCTCTCTCTCTGTC TCAATCTCTCAATCTCAATCTCTCTTTTGCTTATCTCTTTACCTTCAATGATAGGTAAAT CGTGCAAGACACTTCTACGAAAACCTATGGGATCCTCNCCTTATAGTGAG |
| GenBank Accession | BX001420 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:6346520 - go to primer design |
| BLAST e Value | 3e-48 |
| Hit Clone Code (BAC ID) | F28M11 |
| Hit Gene Code | At4g10180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | light-mediated development protein 1 / deetiolated1 (DET1) |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K1L20
| Sequence (A. th genome BLAST matches underlined) | >80-K016831-022-355-H10-8409 TGATCATGAGATTTCCCGGACTGAAGCCATTTACTTCTGACCAATTGTGGTTAAGTTATA GTCAACCATTTTGGCCGTCAAAGAAGGCCTCTTCCTCAATTAGTCGCGTATGTTTTAAGC AAAAAACGATTATTACTAATTTACTATAACTATGAAATTAAAAATAAACTTATACCATTT TGGGTTTGACGCTATGGGATCTCCCNTTATAGTGAGANNNNNNNNNNNNNNNGNNNNGNN NTNCNNGNNNNANNCNTNNANGAAGANCNANNNNNNNNNNNNNNANNGNNNNNNNGGGNN NNNNGNNNGNNGGGGNNGGNGNNGNGGGGGGGGGGGNGNGGNGGAGGNGGGNNNGGGNNG GGGGGGGGGGGGGGGTATTTTGGGAANAAGGAGAGGGATGGAGTATGATGAAGTTTNTGT GAGAATAAATGTATGTGATGAGAAGTAAAGAATGTTTTGGATGGTGAAGAGGGTGAAANT ATATTGATGGAGGAGAGGAGAGGGTGGAGGTGATAATAGAAGATGATTGAATATTTT |
| GenBank Accession | BX001419 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26495381 - go to primer design |
| BLAST e Value | 2e-76 |
| Hit Clone Code (BAC ID) | K1L20 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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