SimpleSearch - Line and FST details


Line specific information

 
Line ID 372G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N435694)
Segregation Analysis 50:42:30
Confirmed for Hit At5g61120
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g61120

 
Sequence (A. th genome BLAST matches underlined) 
>47-K017075-022-372-G06-8409
GATCATGANATTTCCCGGACATGAAGCCATTTACAATTGATATATCCTGGGTCCATCGCC
AACTTTTGATTTTGACCCTTGAAAAGCCAATAAAAAACTCAGCAAGATATGTTTTTAGTC
ATCTATGGGATCTCNCCTATAGTGAGAAGCCAACCACAGAGGTCCCCTCATGTATGCTTG
GAATTCAGAGCAGATAATGACCTCTGATCTATCACCGACAAGACTGAAAGGCTGACGACT
GAGCAAAATTCCACACAGATCGATTGGCTCGTCTGGGGCGGTTATGGGATCCTGCATATA
GTGAGATCGGGGTTTGCTCAGCTACGGGATCCCCCTTGTAGGAAGCGCCTTCCTGTTACC
TTATCTATTCACTAGAGTGGCTCACAACAGGGCAATGTAATCCAACGAGGTTTCCGGATA
TTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATAT
TTTTGGAGTAAACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCAT
TGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGTTCTGTTAGGT
CCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGGACCTCTATGGGAT
GenBank Accession FR809027 [GenBank]
Graphic View Graphic view of gene At5g61120
Predicted Position of Insertion Chr5:24583650 - go to primer design
BLAST e Value 5e-34
Hit Clone Code (BAC ID) MAF19
Hit Gene Code At5g61120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc ion-binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37