SimpleSearch - Line and FST details
Line specific information
Line ID | 401E01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N438449) |
Segregation Analysis | 48:48:24 |
Confirmed for Hit | At5g60740 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g60740
Sequence (A. th genome BLAST matches underlined) | >05-K018290-022-401-E01-8409 TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTAGTATGGCCAGGT TCGAAAAGTATGGCCAGGGTATAAGCTATACCAGTCACACAGTATACAAGACAGATGAGG ACACATAATTGTCTGTAACTGTTGATCTTGGATTGTTGAAGAAGTAGAACATGGATAGAT AAACAAGCGGCTTAACGATGGTGTTGAAGTGATCAACTGTGTCTTTCGCTATGGGATCCT CCCCTATAGTGAGATCCNGCTCNNCTTTCTCTCCCNTANTGTAGTTTATCCACATAGAAA GATCTTAATGCANTAATCTTACACAAGAGAGCTGAATAAAACGAAAAATTGTTGCCAGAA TACATGAAAGAAGCAGAGTTGTTGTCAAAATAGCTTGAAAGTTTCTACTTACAAACAGCA ATAACTGTATATGTATATCCCATGGCACCAAACGTTTCATCGCTCACTTTATCAAGCGTT CCTAAGCAGATACCAGCAAGTAAAAGTATTAGGTAATCTACAGCTATGGGATCCTCCCTG ATGGGGGANNNNNNNCNNNNNNNNGNGNNNNCCGGGNGCNGCCCGGCGACGGCGGGCGGC CGCGCCGCGCCGGGGCCGCCCGCGCGGGCCNGCGGGCNCCCGCCCCNNCCCCCCCCCGCG CAGCGGGGCCCGGCGCACGCCCCGGCCCCGCCGGGGGGGGACCGGGCAGCNCCCCCCACA CCACGCGGCGGCATACGGCCGACGCGCCGACAAAGAGAGAGAAGAAAACA |
GenBank Accession | BX287434 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:24426338 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | MUP24 |
Hit Gene Code | At5g60740 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | ABC transporter family protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |