SimpleSearch - Line and FST details


Line specific information

 
Line ID 435B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N441680)
Segregation Analysis 50:50:49
Confirmed for Hit At3g46350
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g18920

 
Sequence (A. th genome BLAST matches underlined) 
>26-K018190-022-435-B04-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAAGAGCGACAAAATTCTCATGTC
TTATGACAGTTATCATACTCCATAACATAATAAGTACACAACCCACCTATGGGATCCTCC
CTATAGTGAGAGTACCCTTTTTTGATCCTGCGCTTATACAAAGGAGAATGACGTGCACCT
ATCGGATCCCCTCTATTCTGAGACCACAACTTCATGCGCAGGGACATTCCTAAACCTAAC
CCAATAATCATCTACCATGATCTTCTTCTCAGGACCACCTATCCCATCTCTCTGACCGCT
CTCACGATACACCCAGAGATTCCATGATCCTCATCTCTCTCTTTCACCAACTCCGCGTTT
TGATTCTCCCCAGATTCACGTCATTGCGGCGATACCATTAATGATGGTCCACCTATTGGA
TCCCCCATAATCTGAGATGGGATCCTCCCCTATAGTGAG
GenBank Accession BX290292 [GenBank]
Graphic View Graphic view of gene At4g18920
Predicted Position of Insertion Chr4:10370196 - go to primer design
BLAST e Value 8e-27
Hit Clone Code (BAC ID) F13C5
Hit Gene Code At4g18920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation histone acetyltransferase (DUF1264)
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At3g46350

 
Sequence (A. th genome BLAST matches underlined) 
>26-K018180-022-435-B04-8409
CCTTAAGACGAGCCGGTAACTACGTTACAGTACTCATCGGATTCAAACTTCATCCAAAGT
GGGAAACTTGGTAGAATTGATACAAGTCTACAGACATTTTTCCTAAAGCAACAAACAACG
TTAAGATACTTTCCAGACGGAATACGCAATTGTTACAATCTTACGGTCAAGCAGGGAACC
AACTATTTGATCAGAGCTATGGGATCCCCCCNAATAGTGAGGAAAACNAGCTTTGAAGAC
ATTGTTGGACGGATTAAGGTTTATGAAGAAAGAGTATGGGATGAAGAAGATGAGACTCAA
GATGATCAAAGCAAGTTGATGTATGCTATGGGATCCTCCCTATNGTGAG
GenBank Accession BX290291 [GenBank]
Graphic View Graphic view of gene At3g46350
Predicted Position of Insertion Chr3:17037254 - go to primer design
BLAST e Value 8e-104
Hit Clone Code (BAC ID) F18L15
Hit Gene Code At3g46350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LRR receptor-like Serine/Threonine-kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37