SimpleSearch - Line and FST details


Line specific information

 
Line ID 546D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N452360)
Segregation Analysis 50:43:34
Confirmed for Hit At4g04620
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g04620

 
Sequence (A. th genome BLAST matches underlined) 
>28-K020585-022-546-D04-8409
NNNNGGAAGAATATCGGACATGAGCCTTTACATTGAATATATCCTGGATTTTATTAGTTA
CGACGCTTATCTTACGTCAGCGAGATGACTACGACGTCGTTGGATTGTACTGGTCATGAG
GGAGTCAGCTCATAATTGAGCCTTTATAGGTTCGGATCACGGATGGGCTTTTCTGTCGTT
GACTTGAACGGGACTGCGAAGCCATCCTATATAGAGCGAGGACATCTTGGCAGCCTTCAC
TCTAACTTCTTCATCATCACCACTAACCGCTGCACCCGCATCAAGATGAGCAACCCTGGG
ATCCCCCCCATAGGGAGGCTAACGGAACCCCCCAATCCCGGGGTAACCCGAAATGGAACC
CCCCTTTTGGACACACCTTTAGAAACCCCCC
GenBank Accession BX547611 [GenBank]
Graphic View Graphic view of gene At4g04620
Predicted Position of Insertion Chr4:2330235 - go to primer design
BLAST e Value 1e-24
Hit Clone Code (BAC ID) F4H6
Hit Gene Code At4g04620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ubiquitin-like superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g15390

 
Sequence (A. th genome BLAST matches underlined) 
>28-K021189-022-546-D04-8409
TTGAGCTCTTGACGACATTGCCGCTGCTGACTGCCAAACTATGGGATCCTCCCTAAAGTG
AGAACTACGGAAACCCCAAATGAATGTAGGTTAAGAACACACCACAATGTTAGAACCGAC
GAAATTATAAGTAAAA
GenBank Accession BX650486 [GenBank]
Graphic View Graphic view of gene At3g15390
Predicted Position of Insertion Chr3:5199606 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) MJK13
Hit Gene Code At3g15390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation silencing defective 5
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37