SimpleSearch - Line and FST details
Line specific information
| Line ID | 671B01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N464333) |
| Segregation Analysis | 50:49:33 |
| Confirmed for Hit | At2g44730 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g44730
| Sequence (A. th genome BLAST matches underlined) | >02-K022932-022-671-B01-8409 AGCCATTTACATTGAATATACCAACGCTGATAGTTTAAACCGAAGGCGGGAAACGACAAT CTGATCCCCGGGTATGGGAATCTCTCCCTATAGAGAGAGATAATTTCCATTGAGAACTGA GCCATGTGCACCTTCCCCCCAACACGGTGAGCGACGGGGCAACGGAGTGATCCACATGGG ACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAGCAGTCCATCCGTGAGATCAT ACGACGCACCGGGAAGGCGCGCAACACGATCGCACAGCATTTGAACGCACGTATGGCACC CTCGCTACCCTCCTCCTTCAGGAATTCTCACAACTCTAGCACCGTAACTAGATCCTCCTG CTCCGATACCACGACCAGCTCTCGGATTTGAACTCACACCAGCACTTGGACTCGCCGAGT ATCTCTGATCAATCTTACCGGCAAACCTCCGTCCACGCTG |
| GenBank Accession | BX661118 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:18437459 - go to primer design |
| BLAST e Value | 5e-70 |
| Hit Clone Code (BAC ID) | F16B22 |
| Hit Gene Code | At2g44730 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g13840
| Sequence (A. th genome BLAST matches underlined) | >02-K023048-022-671-B01-8409 NNNGGCGATAATCGGACATNAGCCATTTACAATTGAATATACAACGCTGCATAGTTTAAA CCGAAGGCGGGAAACGACAATCTGATCCCCGAGTATGGGATCCTCCCTATAGTGAGTGAA AACTTGGATCCTGAACTTACCAGATAATCATTATGAATATTATATGCCGATTAAATAATC AAGTGCTCAATAATCAACGAAGTCTTCTTAACTCAGCGGTAGAGCGCGTGGCTTTTAACC CCGTGGACGTGGGTTCGATCCCCACAGACGGCGATTCTATTGAGTATGGGATCCTCCCTA TAGAGAGTCATCTCTCTCCCTCCCTTCCCTCCCTCCTTCACGAATTCTCTCAAATCTACC ACCGCAACTACATCCTCCTGCTCCCACACACCGACCACGTTCTCCGATTTCAACTCATCC CAATACTTGGACTCGCCGAGTATTTCTGATCAAATCTTACCGGGAACACCTTGGCTCCCG CTGCGCTATACTCACCCCAGTACGAATCCGAATTCGAATCCCGCCGCTACCACTACTCCC |
| GenBank Accession | BX661119 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:4470988 - go to primer design |
| BLAST e Value | 6e-48 |
| Hit Clone Code (BAC ID) | MAC12 |
| Hit Gene Code | At5g13840 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | FIZZY-related 3 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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