SimpleSearch - Line and FST details
Line specific information
| Line ID | 828H05 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N479481) |
| Segregation Analysis | 50:25:23 |
| Confirmed for Hit | At2g44050 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g44050
| Sequence (A. th genome BLAST matches underlined) | >40-K025711-022-828-H05-8409 CATTTAAATTGAATATATCCTGTTTGAGCAGAATGATTGTTTGATCATCATCTCTGCGAT CGGCATCCTCCCTAGAATGGGATATCTGTCCCATAGTGGTATTCTCAGTAAAAGTAAATC TTTCTCCGCCTGACATTAACACGTGTGTGTCGACGGAGATCAAGTCCAATAATCTCTCGT TCCCCTCATCCACATCCGGTAAGCTTGCTTTCTCTCACTTCTCTTATAATAACTCAAATC GTTTTTTCGCAATTTCGTGATTGAGATGTTAACATTTGGTGTTAGGATTTGCGTCACCAC TAGCTGTANAGAAGGAATTACGCTCTTCATTCGTATGGGATCCTCCCTATAGTGAGACAA NTCACGCACCACCGACTCTCCTAATCATATTAATCACATACTCT |
| GenBank Accession | CR399915 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:18224289 - go to primer design |
| BLAST e Value | 2e-85 |
| Hit Clone Code (BAC ID) | F6E13 |
| Hit Gene Code | At2g44050 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g40960
| Sequence (A. th genome BLAST matches underlined) | >40-K025721-022-828-H05-8409 GNAGCCATTTACATTGAATATATCCTGAGGAGGGCAGCTGACTTGGTATATACGGGATAC TTTGCAAGGGTGACCGGAATTACAAGATCTGCACTACGCTTACGGACTATCGTTTGCACG TGGTCAACTGGATAGATGCCACACCGTCACTCTTTAGACATGCGGATGTACCGATGCCCC TTGATCGAACAATCCTGGCGACCTCGTGAAATCAGTCCGACGCAATCGGGCAGGCCACGC AACCCGATGACCCAGTATTTGAACGCGAGGATGGGAGCGTCCCTAGAGAGAGATCCCTCC GTAATGGATCCCAGGGGTGGTATCCTCCCCACAATGAGGAGAAGCTTCCATTTTCGTTCA CAGTGATCTCTATGGTCTCTTTCTTATCCTCTTTCTCGTTGTTCTCAACGTCCATGTCTA TGCATANCTCATTTATTACACTCATGTATGTGCCTCTCTGCTTTGTGCTACAAGGTTTTA CTACTGATATGCTTTGTTTTANGATTTGACTTTGGTCGTCCTCTAAATTACGGCTCCTAG AATTTGAGACTTCTCATC |
| GenBank Accession | CR399916 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:16413134 - go to primer design |
| BLAST e Value | 4e-89 |
| Hit Clone Code (BAC ID) | MMG1 |
| Hit Gene Code | At5g40960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | transmembrane protein, putative (DUF 3339) |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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