SimpleSearch - Line and FST details
Line specific information
| Line ID | 839D03 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N480487) |
| Segregation Analysis | 50:29:28 |
| Confirmed for Hit | At3g19150 At4g27590 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g19150
| Sequence (A. th genome BLAST matches underlined) | >20-K025505-022-839-D03-8409 NNNNCCGTAGTATTCGGACATGAGCCTTTACATTGAATATATCCTGCCGCCGCTGCCGCT TTGCACTGCGGAGGAGCTTGCATGTTGGTTTCTACGCAGAACTGAGCCGGTTAGGCAGAT TATTTCCTTTGAGAACTGACCCATGTGCACCTTCCCCCCAACTCTGTGAGCGATGGGGCA ACGGAGTGATCCACATGGTCACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAT CAGTCGATCCGTGAGATCAGCCGACGCCCCGGGCATGCCCGCAACACAATCGCAAAGTAT TTGAACGCAGGTATGGGATCCTCCCTATAGTGAGAGAACAAGTCTTATTTGGTCAGGGTC TATGAGAACCATCGAACAAGTCTTTTCTCGTAATTGGGTTTTATATTTTATGAGAATCAA TTAAAAGCTAAAACCAATGATGTGACATATATCGAGGGTATATATATGAATGGTTGAGGT GTGAATAGAGATTTGTCAAATTAGCTTGATCCCTTCCATTGTATGGGATCCTCCCTATAG TGAGA |
| GenBank Accession | CR361465 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:6618082 - go to primer design |
| BLAST e Value | 3e-102 |
| Hit Clone Code (BAC ID) | MVI11 |
| Hit Gene Code | At3g19150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | KIP-related protein 6 |
| Insertion Classification | Promoter |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g27590
| Sequence (A. th genome BLAST matches underlined) | >20-K025536-022-839-D03-8409 AGCCTTTACATTGAATATATCCCGAATTATTATATTTTCTTTATAACGAAGAATCAGGAA TATATTCAGTGAAAGTAGACTACTACAATCAGAAGGTGACGGTGTGGGGGATTTGTACAT ACTCTATGTGTTAGCGATGGTGAAAAAGAAGCGAAAAGAATCTCGGTTTTGGAGTGCTAA GGAAGAGGACAATAATAATCCAGATACCGTTGATGATTGCATTCCCTCAAAAGAACACAC TATTATTAAAACTTCATTTGATACCGATAAATCATCGGCGTTTTATACGTATTCTACACC TCCTCCGAGATTCATTATAAGACCTCCTATGTCACTTATTAGAACCTCTTCATTCACATG GAAAGCCGTGAAGAAGGTCTTCACTAGATCCCTTTCCTTTTGAATCACGTCTATATATGA CTCTACTAAGTTTCTAATAAAGCTCCAAGAAATCACGTATGGGATCCTCCCTATAGTGAG A |
| GenBank Accession | CR361466 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr4:13771413 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T29A15 |
| Hit Gene Code | At4g27590 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Heavy metal transport/detoxification superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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