DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_040812c
Line Availability available from NASC (N662199) and ABRC (SALK_040812c)
Confirmed for Hit At5g04410
Parent of DUPLO pair 1066
Parent of pair(s) none

Gene hit At5g04410

 
Sequence (A. th genome BLAST matches underlined) 
TGGTGTTTGTACCTCTCCAATCATATAGCCTTTAACTTTGGCAGTGCTTTGCTGCTCAAT
ATTTAAATTTTTATTCGAAGGGTTTGGTGTAGCTTGAATTGANNCNNTNNNNNNTGNTNN
ANTNNTGTTTGATNTTCTCNTNNTNNNTGNNGTNNCGTGANCTGNNNCNGAAGATTGTGC
TGCGTGTAGACGCNTTGCGTCCTTTGTTTGGAACTGTGAAGCAAATGAAGATGGAGTAGG
AATGGCTCCAAGCATGTGGCTCGTCTTTTTGAGAAATGGGTACTTCGGAGCTACATGATT
TAGATTCAAAAGAGTCAGAATCAGTCAT
GenBank Accession ED586160 [GenBank]
Graphic View Graphic view of gene At5g04410
Predicted Position of Insertion Chr5:1246151 - go to primer design
BLAST e Value 2e-83
Hit Clone Code (BAC ID) T19N18
Hit Gene Code At5g04410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAC domain containing protein 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED586160 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37