SimpleSearch - Line and FST details
Line specific information
Line ID | 015C10 |
Vector Used | pAC106 |
Line Availability | available as T3 set from NASC (N401378) |
Segregation Analysis | 50:50:41 |
Confirmed for Hit | At5g20990 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g20990
Sequence (A. th genome BLAST matches underlined) | >75-K013040-022-015-C10-35St NAATAGACGTAAGGGACGACGCTTCATCCCCTATCCTTCGCAGACCCTTCCTCTATATAA GGAAGTGCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC TTCGGTTTAAACTATCAGTGGTTGATAGTCAACTCTACATTATTAATATTTGCATCCATT TTGCCACATTATAACAAAATCGAGAAGGTGAATCTATGGGATCCTCCCTATAGTGAGTCG TATTACTCACCTTCCCCCCATCTCTGTGAGCGACGGGGCTACGGAGCGATCCACATGGGA CTTTCAAACATCATCCGTCCGATGGCCGTTGCGAGAGAACCACTCCATCACTGAGATCAC CCGACGCCCCGCCCATGCTCGCACCCCCAATCGATACGATTTTGAACGCTTGCCCAACCC AGCCCCACGCTCCCGCCACCCGGGCCCCCCCCTCCCGGTCGATCTCCCCCCTTCCGTCGC CCACCAGTCACTCCGCCTTTTTACCTTCACACCCACCCATCCTTTTTGCCCCCCAACATG CCACGCCTACCGCCTCCAACTTCTCCCCACTCGCCTTCTCAGTCCTGCCCATATTCCATG CGTGCTTCTTCTACTTCAGGGCCCCCTACCCCCACTCACATACACTCTTCCTTCTTCAAC ATCGCCCACACCTTACCTATTCCGTTATTCACTCTCACCCCCTAAATCACCCTCACCACT TCTTTTCCTTCTTCCATCTCATCTCCTTTAGACGTCCTCTCTCCATCTCTACAACTCCAT TTCCCCCTTTGTCCATTTTACATCCCCCTTTTCCGTCACACAATCGTCTGGTGTCCCCGA TAAGACTCCCCCCCCCTCTTATTCATGCGGTCTCCTATTTTATCCCCCCGCCATCATATA TTTGTTTTTCC |
GenBank Accession | AL752584 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:7130100 - go to primer design |
BLAST e Value | 6e-28 |
Hit Clone Code (BAC ID) | F22D1 |
Hit Gene Code | At5g20990 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | AL752584 [GenBank] |
Gene hit MPO12
Sequence (A. th genome BLAST matches underlined) | >75-K019122-022-015-C10-8409 AATTCAGTGAGTGATAACTCTGTGACCAGAAACTTCTTACAAGACTTACTTCATTTTGGT CGATTAAAAAGAGTGCACCTATGGGAGTCTCCCTATAGTGAGTACGTTCGCCCATTTGTA TGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGAGCGATAATGACT TCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAAAAAGATCC CTTGGCTCGTCTGGGTCGACTATGGGATCCTCCNTATAGTGAGNAAATACTTTTAATTAA CTATCCATGTTGATCACAAAGAGATTTCTTTATAAAAAAACTTTTGGCACTTATATTTTT TAAACACCACTCCATATATATAGTTGGTAACTTATCCTTAAATTACTATATCTTAAGGAG ATCAACAAGTTGAATCTTTCTCGAAGTGATTTAAAGAAAATAAGAAGATAAGTGAAACTG ATGATGCACTA |
GenBank Accession | BX284964 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:16124676 - go to primer design |
BLAST e Value | 4e-69 |
Hit Clone Code (BAC ID) | MPO12 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | BX284964 [GenBank] |
Last Updated on 10.06.2021 13:37 |