SimpleSearch - Line and FST details
Line specific information
Line ID | 017C05 |
Vector Used | pAC106 |
Line Availability | available as T3 set from NASC (N401565) |
Segregation Analysis | 50:49:47 |
Confirmed for Hit | At2g31865 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g31865
Sequence (A. th genome BLAST matches underlined) | >35-K026159-022-017-C05-8409 GNAGCCATTTACAATTGAATATATCCTGCAGCCTCATGACTTGTTTCAACACTGATAAAG CTTGCTGGTCTCTGTGTATGCATACTTCATGTGCGTAGCATAATTGTGTTCTTACCAAAA ATGAGGCCGCATAACTTTGCCTATCGTCGTTATTACATTTACCTTGACACATGTCTCCTC CAAAATCCTTATATACCCTCCTCTCCGAAAGCAATACGAGCAATTGAGTAATTCCCAAAC ATCATACAACACAGGAAAGAATGACAAACTGCCTGAAAGACAAATTTTGATTACCGAATG AGGGCCTCCCTTTTGTATGGGATCCTCCCTATAGTGAG |
GenBank Accession | CR395154 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:13547372 - go to primer design |
BLAST e Value | 4e-21 |
Hit Clone Code (BAC ID) | F20M17 |
Hit Gene Code | At2g31865 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | poly(ADP-ribose) glycohydrolase 2 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | FR800483 [GenBank] |
Gene hit At2g23780
Sequence (A. th genome BLAST matches underlined) | >35-K013475-022-017-C05-8409 NAATCGCTCCATAGTACACTTCCCTGGACTGAAGTCACTTACAGTTGAATATATCCTGCA GATGGCCTAAAACGTAGAGATTTGGACGAAACGCAAGAGGAAACCACACGTCTTGGGAAA AAACTGAGTCTTACTGTTGTTGGGAAAGAAAGTTCCAGGCTCTATCTGACTTTTGGGTTT TCTCGTTTTTTTCCATATATTTTCTTTGGAAATTTTGATTAATTATTGGGCCGATTATAA TAATTTCTAAACTGATCTTGGGCCTGATTAGCCTCAACCACACATTTTGGTAGATAAAAT GATGCCAAAAGCTAGTTTTAAACATAAGCTATGGGATCCTCCCTATGTGAGATTAATGA |
GenBank Accession | AL752747 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:10124532 - go to primer design |
BLAST e Value | 3e-91 |
Hit Clone Code (BAC ID) | F27L4 |
Hit Gene Code | At2g23780 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |