SimpleSearch - Line and FST details
Line specific information
Line ID | 020A03 |
Vector Used | pAC106 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g23780
Sequence (A. th genome BLAST matches underlined) | >17-K013161-022-020-A03-8409 NATTGATCCATGTAGATTTCCCTGACATGAAGCACTTTACAATTGAATATATCCTGTAGA TCCCTTAAAAGTAGAGATTTGGACGAAACAAAAGAGGAAACCATACATCTTGGGAAAAAA CAGAGTCTTACTGTTGTTGGGAAAGAAAGTTCCAGGCTATATCTGACTTTTGGTTTTTCT CGTTTTTTTTCCATATATTTTCTTTGGAAGTTTTGATTAATTATTGGGCCGATTATATTA ATTTCTAAACTGATATTGGGCCTGATTAGCTACAACAACACATTTTGGTAGATAAAATGA TGCCAAAAGCTCGTTTTAAACGTAAACTATGGGATCCTCCCTATAGTGAGTCGATTTACT CAANNNNNNNNNCGTGCGGCTATAATTCGCTGTTCGTCTTTCCGCGGACGGGCTCAACTC CCGCCCGCCATCGCGATTTAACCTCGTCCCAGTTGCGCCGGGCACATACCAACCCCAATT GATGGGCGCAAAAAATTTTACTTGTATTGTTTCCCCCCCTGTTCTTTACTACCACTCCCC CCCCCCTCTTGGGACGGGGGGCGGAACCCCCCCTTCCACCATAAACNGCAGTACCCCCTT ATTTTCGGCTGACCAATATTTGCCGCGTTCCCACAATCCTGGCGCCCTATATCTCTACCG TGGTAGGGGACTATAATTAATCCAACCAGTGGCCGCTTGTGTTTCCAAAACGCTCCCACT CATCCATTTTTTTGTCCCTTTTTTCGCAACACCCTTATACTGTCCCCACACCGCCCAAAA AGTTTTCACCTATTTTATAATTACATGAACATCCCCCCCGTGTGCCCACATCCACCGATA CCGTGTTACACCAACACAATGTTTTTTTATACACGTTACACCCCCCCCTTANTTTCTCCA ATTCTTCTCTCTCTCCCACTATTTTCACTCCCAACCACTCTTCCGCCCCAATCAGCCTAT CCACCCACGCCGTTCCCTTCTCGTATCTCCATTA |
GenBank Accession | AL753162 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:10124534 - go to primer design |
BLAST e Value | 5e-133 |
Hit Clone Code (BAC ID) | F27L4 |
Hit Gene Code | At2g23780 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | AL753163 [GenBank] |
Gene hit At1g08765
Sequence (A. th genome BLAST matches underlined) | >17-K026164-022-020-A03-8409 NAGCCATTTCAATTGAATATATCCTGATTGTAAATGGTTTCCTCTATATATCTTTTTTTC ACTTAAAAGATTATTGTATTCTCCAGTTTCATTAGTTTATTAGTATGGGATCCTCCCTAT AGTGAGACNTATTACCCCCTGTGTTTGTGAGAAGGGCAGCGGAGTGATCCGCATGTCACT TTTATAATCCTCCGTCGGATGGCGTGGGGAGAGAAGCAGTCGATCCGTGAGATCAGCCGA CGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAGGTATGGGATCCTCC CTATAGTGAGTCNNANTANNCNN |
GenBank Accession | FR800626 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:80147 - go to primer design |
BLAST e Value | 2e-17 |
Hit Clone Code (BAC ID) | T25K16 |
Hit Gene Code | At1g08765 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | novel transcribed region |
Insertion Classification | TS2TE |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |