SimpleSearch - Line and FST details


Line specific information

 
Line ID 039A05
Vector Used pAC161
Line Availability only available from NASC (N403653)
Segregation Analysis 100:33:22
Confirmed for Hit At1g76550
Parent of DUPLO pair 12560
Parent of pair(s) none

Gene hit At1g76550

 
Sequence (A. th genome BLAST matches underlined)
>43-K029744-022-039-A05C-8409
CATTTACAATTGAATATATCCTCCTTTACATGTAGGTTCGAGTATGTGTTCTTATGATAA
ATTGTCTTCTTTGTTTCTGCAGCTACTTCTCCATCCCGAGTCTGATGATTCTGCTCAGCT
ATCCCAGGTAAGAAGAAAGAAAATGATGGAGTTACTGTGCTATAAAAAGTTGGAATTCTA
ATTGCTCATTTACTTTCTTCTTAGATTGAGACGGAGAAACTTCTGGCTTATCTTGTGGAG
ACTGAAATGAACAAGCGCTTGGTATGTTGCACATCTTTTTCACTTGTCACAATCCATTTT
TTTCAAATTTTTTTGAATAACCTTGCCTGAATATTCAAGTTGTCCCTAAAACTAAGTTTT
GAAAATGACAGAAAGAAGGAACCTACAAAGGGAAGAAATTCAACGTTTATCTG
GenBank Accession HG968626 [GenBank]
Graphic View Graphic view of gene At1g76550
Predicted Position of Insertion Chr1:28724127 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14G6
Hit Gene Code At1g76550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphofructokinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g47090

 
Sequence (A. th genome BLAST matches underlined)
>33-K030268-022-039-A05-8409
CCGGAATGAAGCCATTTACATTGAATATGTCCAGGAAGATTAAACCGAGGGCGGGAAACA
AGAATCTGAATACCCGGAATATGCGATCCTCAGCTAGGTCGATCCGTCTGAATGGTAAAG
AACAGAAAGAGAAGGCAACAACAGTCTTACCGCCAGAGGAGATGCAAGATATGATGGATC
AGTTCACATCAATCATGGAACAGAAGTTCTTATCGGGAGAAGATCATCAACATTTGGATT
ACGCAAAGATAGACAATGACGAGACTCTTGATGATCATTGGCTTCGAGAGATTGGCCGTG
ACGCTGAAGATAAGTATGGGATCCTCCCTATAGTGAGTCANATTGCGCACCCCCCCTAAT
TAGGGGTAGAATGGTCTCCCTATAGGGAGGATCCCGTTCCCCAGCGTTAT
GenBank Accession CR934252 [GenBank]
Graphic View Graphic view of gene At5g47090
Predicted Position of Insertion Chr5:19128200 - go to primer design
BLAST e Value 6e-116
Hit Clone Code (BAC ID) K14A3
Hit Gene Code At5g47090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation unknown protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 07.07.2016 14:03