SimpleSearch - Line and FST details
Line specific information
| Line ID | 053F12 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g41762
| Sequence (A. th genome BLAST matches underlined) | >94-K012481-022-053-F12-8409 TGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGATGGGA GAATTAGCAAACCGTAACGAAGATGTTCTTGGCAACCATCTTTTGATGGGAGTCCGGCTG TTCGATAGCCGGCCAAGGGTGATGAACGAAATGTGAACCCTTGTCTCGCCTAGGTTGGAT GGGCGTGCTTCGTTGGAAAGCATGGATCCGCCTATGGGATCCTCCCTATAGTGA |
| GenBank Accession | AL754202 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14196632 - go to primer design |
| BLAST e Value | 6e-83 |
| Hit Clone Code (BAC ID) | F21A14 |
| Hit Gene Code | At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At2g01008
| Sequence (A. th genome BLAST matches underlined) | >94-K012358-022-053-F12-8409 TGATCCATGTAGATTGTCCCGGACATGAAGCACTTTACAAGTCTTTGAGAGATTGTGGAT ACTTGATACTTGAGTTTAGCTAATATGCTGGGATCCTCCCTATAGTGAGTGGTATTACTG ATGTTCGATAGCCGGCCAAGGGTGATGAACGAAATGTGAACCCTTGTCTCGCCTAGGTTG GATGGGCGTGCTTCGTTGGAAAGCATGGATCCGCCTATGGTATCCTGACTGTAAGCAATG TGTGAACTGAGCCCATGGGCATCGACACCTTGCGGCTAGGAACTGGAACGAGACGGGTGG CAAAGATTTCGAGTAGCACTTCATACTACCGTGGGTTTTTTAAACCTTCCGAGTTTTGTT GATGTTATTCCGAGAATTAGCAAACCGTAACGAAGATGTTCTTGGCAACCATCTTTTGAT GGGATCCTCCCTATAGTGAGTCGATNTACTC |
| GenBank Accession | AL754200 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:2660 - go to primer design |
| BLAST e Value | 2e-132 |
| Hit Clone Code (BAC ID) | F23H14 |
| Hit Gene Code | At2g01008 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | maternal effect embryo arrest protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit At1g01225
| Sequence (A. th genome BLAST matches underlined) | >94-K012428-022-053-F12-8409 TGATCCATGTNGACTTTCCCGGACATGAAGCACTTTACACTTGAATATTCACTGGAACCT ATCTCGCTGACGTCTGATCCCACCGTTAGAGCTTACCTTGTTACGCCGTTTCCTGCATTT TCCACAAGCAAGGTAAAAAAAAGCTTTGTGCAGAGAGAGAGAGAATAACATAAGTGGGTT TGCTTACATCAAGATTGAGAGAGAAGAGCTACTGCCGGGAGATCACATCTATACTTACAG AGCATGTCTTCGCTTATTCTCACCACGGTAACTTTATATTCATTCTTCCCAAGTGAGCTC CTTTCTTTCTCGTTCATTCAATCATAACATCAAAAAGTGAAATTATCCTCAATGCAAGTC TTTTCTTTTAGTTTCTACTGGGCGGTTTAATCTTCTTATTGAAACTGTAAATTCACAAAG TTGACGACTTTATCTATGGGATCCTCCCTATAGTGAGTCGT |
| GenBank Accession | AL754201 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:95946 - go to primer design |
| BLAST e Value | 5e-130 |
| Hit Clone Code (BAC ID) | F6F3 |
| Hit Gene Code | At1g01225 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NC domain-containing protein-like protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL754199 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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