SimpleSearch - Line and FST details


Line specific information

 
Line ID 054E12
Vector Used pAC161
Line Availability only available from NASC (N405148)
Segregation Analysis 100:100:72
Confirmed for Hit At3g25710
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g25710

 
Sequence (A. th genome BLAST matches underlined)
>93-K012427-022-054-E12-8409
TGAATATACACTCTTCTCCTTTCATTATGGTTTGATATTTCAGAAACTAATTCACTATTT
TGAAAACCCTATGGAAAAATAGTTTTAATTAATTAATGATCCTTCAAAATTTCTCTTTAT
TTAGTTATTATTGGTTAGAGTAGTAGTAATTGTTGTTGTTTTTTAATAAAGAGAGTAGTA
GTAATTGTTCTTTTTCTGATAAATATAGTACTAATTATTCAGTTTCAAAAATGATAAGTA
CTATATTTTTCAATATTATCATTTTTATCTATCTCTGTTCAACTATTATCGTTTAGTAGT
TGTAAATTTTCAAATTTAAAATAAATGTATCAAATCGATATTTTTGGTAAGTAATTATAG
TCCACAGATGGGGTATTTTTGTACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAC
NNNCCCTTCTGCTTCCCTTTGGTTTTGTATACACGGACACAGCTTCTTTGCTATGGGACC
CTCCCTATAGGGAGCCCTATCAGGAGAGTCCCATGTCCCAAATTCCCCCCCCCGGCACAC
CCCCCCTTACCCAATCCTCGCCTGGTCCTCCTACCGAAAATCTCGAAATCACCACTCTCC
ACGACCTCCGGTGACCCCAGACTTCATACACCGGTCACCTTCCAAAACCTACCCCCTCCT
CGTCTTAACGCCCTACCTCCTCTCTTTTCATAGAAAACAAATTTACTTCTTTTTATCAAA
GenBank Accession AL754489 [GenBank]
Graphic View Graphic view of gene At3g25710
Predicted Position of Insertion Chr3:9370101 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K13N2
Hit Gene Code At3g25710 [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix 32
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 14.10.2014 10:23