SimpleSearch - Line and FST details


Line specific information

 
Line ID 058A08
Vector Used pAC161
Line Availability only available from NASC (N405480)
Segregation Analysis 100:100:76
Confirmed for Hit At5g51930
Parent of DUPLO pair none
Parent of pair(s) 566, 4664, 4667, 11260

Gene hit At5g51930

 
Sequence (A. th genome BLAST matches underlined)
>57-K016087-022-058-A08-8409
CCCGGATACTTGTACTTGTTCAAAGCTTTGGAATTTATCATTCTAATAATGGTGCTAAGC
CCTTTAACACACTTGTTCAAATCCTCTGGTTCTTGATAGTAGTTGAATGTCACTGAAGGA
TTATCCCTTGGGTTCGAGTTCCGGAGCTTCATATGTCCTTTTGAGGGCGGTCCATCGAAC
TTTTTGAAAGATCAGAACCCCCATTCATCCTGCACTTCCAATTTAACATCAAAAGATTTT
ACAAGGACTGCAATGGATTGGGTCAGGATTTTCCTATGGGATCCGTCCCTATAGTGAGAA
AATAATCACAACATCAATAAATAAGATATGATGTTTGAATAAAAATCATTGTGAAAGTGC
TATGTGTAGGTACATGGGGCAGGAAATTATTCGGCAAAGAGCGGCTTTCCACGAAAAGTA
ACAAAAAGCCTAAGGTTCTTAATAGAGAGTAGACAAAAGTTTTCTCATCTATTATTACTT
GTTGTGTTATTGTCTTCTAACATTTTCACACAAATGAAGAAAAGTAAACAAATTTTATTT
CTACCCGTTACTAATACACTATGGGATCCCCCCTAATAGTGAGAANNNNNGTNNNCNCCC
CCCCTCTCTTCATTCACTTCTCTACCACCCCACCCGCCCTCACTTTNAGACAAACCCAAA
AACCCCCCCCTAAACAAAAAAATACAAAAAAGTGTACCCCCCCCGCGCGCCGAATAAAAT
AAAATTATTGCACAACCACCACGCGAACCACCACAATCCAACCCCATGTCCC
GenBank Accession AL936685 [GenBank]
Graphic View Graphic view of gene At5g51930
Predicted Position of Insertion Chr5:21103327 - go to primer design
BLAST e Value 3e-146
Hit Clone Code (BAC ID) MJM18
Hit Gene Code At5g51930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glucose-methanol-choline (GMC) oxidoreductase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936685 [GenBank]


Last Updated on 31.08.2016 09:40