SimpleSearch - Line and FST details


Line specific information

 
Line ID 062B07
Vector Used pAC161
Line Availability only available from NASC (N405875)
Segregation Analysis 100:94:93
Confirmed for Hit At1g35515
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g35515

 
Sequence (A. th genome BLAST matches underlined)
>50-K016090-022-062-B07-8409
TGTCCTGATATTTCCCGGCATGAACCCATTTCTATTGAATATATCCTGCCCCGGGAAATT
ATATACTCTTCTCATTTACCATCATCCTGATCTTAAACATGGAAATTTCACTGTTGGGGA
AAATCAACTCACTGATTTACTTCAAAAACGCCTTGACCCTTCGCCATGTCCTCTCTCTTA
ATTATGATTACTGAACTCTTCTTCTTTACTGCATGCTCCTTTACCCATGGGTACCTCGTC
ACAAGACTGGAGATCTTCCCAAGACGATGGTTGCTCGTTAGGCCGAACCGACTCAATGAG
TGAGTCTAATTTCAAACCGCTAGTTGCCAGTCTTTTTAATACCGGTGTTTTGGTGACAAC
TCAAATCGGATAGCTATTCGATTCACAGTCAAACTGGTTCAACCGGTTTGAAAACACTGG
AGAAAACTAATCACATGCNTTATCTCTTCAGTATATAACAATGAATAATTGTACAATTTG
GTTTATATACTAGCAGATCCAGTATTGAGAAGATAGCATTCTATGCGTTTTGAATGGAAA
ACAAGGTTTTGTAGGCTTCTCTCTCTCTTCTCTCATTTGCATCTTTTACAGAGAGAAAAC
ATCTGATCTTCTTTTTCCGGCAACAATAGCTTCTTTAGTGTTTGGTGGCCAGCTCTCTGA
CCAACACCTTATGGCTTTTCCAGCATGGATGTCTGGCTTTTGTCCGGCGATGTTTAGGGC
AACGTTTGATTGTCATGGTTCTTCTGACGCTGATCGGATCTTTAC
GenBank Accession AL936924 [GenBank]
Graphic View Graphic view of gene At1g35515
Predicted Position of Insertion Chr1:13078164 - go to primer design
BLAST e Value 4e-161
Hit Clone Code (BAC ID) F15O4
Hit Gene Code At1g35515 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation high response to osmotic stress 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936924 [GenBank]

Gene hit M3E9

 
Sequence (A. th genome BLAST matches underlined)
>50-K016100-022-062-B07-8409
TATTTCCCGTCATGAAGCCATTTCCATTGAATATGGACCGACTACGATACGGCTGCTTGA
GAAATATCATGAATAACGTAAAGTGAAATAATGAATGTTAAGGCTTTTAAGGAAACTAAA
ATTAGATATTCGTTGAGATGTAGGGAAACTACTTTTTATTTATCTCACATGCACATGACC
TACTCTATGCCATGTGCCTTAAGCTGGCGCGTTCGATCTTGTTATAATTTGTTCGACCCG
GTACCCTAACACTTTAGAAATCATTTCCATTTTTGTATGATTATGTCCAAATCTGATTAC
TTTTTCATGCGCCATATATATAGAACTCATTTTAATTAAATTACAAATTTGAAAAAATAT
TTTTTTTTGGGAAATTTAAGACCGACAAGATGAGCAAGGGACATGGTTGTAAACTAATTA
TTTCTTTAATTAATCAGCCACAAAAATTCCTATGGGATCCTCCCTTATAGTGA
GenBank Accession AL936925 [GenBank]
Graphic View Graphic view of sequence AL936925 of line 062B07
Predicted Position of Insertion Chr4:13399981 - go to primer design
BLAST e Value 2e-132
Hit Clone Code (BAC ID) M3E9
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 31.08.2016 09:40