SimpleSearch - Line and FST details


Line specific information

 
Line ID 080B02
Vector Used pAC161
Line Availability available as T3 set from NASC (N407598)
Segregation Analysis 100:96:89
Confirmed for Hit At5g06839
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g06839

 
Sequence (A. th genome BLAST matches underlined) 
>10-K016175-022-080-B02-8409
CCATTTACACTTGAATATATCCCTGTATATTGAATATANTGAGTGTATATNACGGAGTAC
TTCCATCTGTCTTCAAGCTCTAAGTTCTCGTCTGGCTATGGGATCCTCCCGGTATAGTGA
GANNNNNNNNANNNNNNNNNNNNCCNNTTTNTTTTTCNNTTCNNAATGGGNNTTGGCCCT
CCTCTAATAAGAATAANNNGNNNCTCTCCCCACCTCGCATACCCCCCTACTCACTCCCCA
CCCTCCTTACATATACCACATACTATATATCTCTCTCGTGGAGGTGGATCCATGCCCGGG
GACATCCACGTGAGCCATCACTGATTGATGAATGGGCAGATNGAGAGAAAAAAAAACACA
CGTTCCTTTTTTTTGTCAATTCAAAAATGGACACGCCCGCAGCGTTAATATAA
GenBank Accession AL937401 [GenBank]
Graphic View Graphic view of gene At5g06839
Predicted Position of Insertion Chr5:2126129 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) MPH15
Hit Gene Code At5g06839 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation bZIP transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37