SimpleSearch - Line and FST details
Line specific information
| Line ID | 086H10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408254) |
| Segregation Analysis | 50:37:23 |
| Confirmed for Hit | K15M2 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g21150
| Sequence (A. th genome BLAST matches underlined) | >80-K012541-022-086-H10-35St NATATTGACGTAAGGGATGACGCTCAATCCCACTATCCTTCGAAGACCCTTCCTCTATAT AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG CCTTCGGTTTAAACTATCATTAGTAGAGCGCCTGATTACCAGATTTACTAAGTACTAAGG CACACAATTTAACAATACCGCATCTGTCTGATTGGATTATCATACTAATTCTCATAACCA TTAATCTATTTATAATTATACAAATTTATAATGAGAGCACACAAATCCCCTATGGGATCC TCCCTATAGTGAGTCGTTTTAC |
| GenBank Accession | AL769513 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:9068051 - go to primer design |
| BLAST e Value | 2e-06 |
| Hit Clone Code (BAC ID) | F26H11 |
| Hit Gene Code | At2g21150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | XAP5 family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit K15M2
| Sequence (A. th genome BLAST matches underlined) | >94-K011905-0022-086-H10-8409 NTGATCCATGGTAGATTGCCCGGACATGAAGCACTGTACAATTGAATATCTCCCTTTCGG GAGACGCACTACTCATAGAGGCGGGGGAATGGATACGTACTTATGGGGACATCTGCATAA AGTGCTCTACTTGACCACATTACTGTCTTGTGCTGTTAGACGTATTTTTAGCTTTGCGGC CTCAATATGAATGAAATGTGTACCTATTCTCCTACTGCTAACTGATATGGTGCTCATCAA TGATGACGACAATATGGCCAGGTTAGCAAGAATTATGTATGGATCATCTTATTTACTTTG CTCTTCGCTCATTAACAATGACTTAGTAGCCAACTATAAAAGATGAGAAATTCGATCCTA TCTTTTTTAAATGTCTTGAGACATGATATATTAATCATAGTCATCGGCTATTTATAAGCG ATCATGGACATAACATAGTGTCATGGAGGCACTGCGCTTTGCGGATATGCACGACTCTCT TTGGTCGGTGATCATATCCTCGTCAGACCTATAAAAACATGCTCAAGGTGGCATCATGTT TCA |
| GenBank Accession | FR802642 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:5059973 - go to primer design |
| BLAST e Value | 5e-59 |
| Hit Clone Code (BAC ID) | K15M2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
