SimpleSearch - Line and FST details


Line specific information

 
Line ID 087G10
Vector Used pAC161
Line Availability available as unconfirmed T2 stock from NASC (N2108208)
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F17A8

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-4-6187252-R-150-a
TGACCAAAAATTGATGGCAGGGTAAAAAGACTCAAGATAATCCAAGGTCAAACCTATTTT
AATTTCAGAACTTTATAATAATCGTTTTAAACTGAAATTGGTTTAATGTAAAAATTTAAC
CAACCTGAACCGAGAACTACAATCAAAGTA
GenBank Accession KG781107 [GenBank]
Graphic View Graphic view of sequence KG781107 of line 087G10
Predicted Position of Insertion Chr4:6187252 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F17A8
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit KG781107 [GenBank]

Gene hit At4g14940

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-4-8542089-R-150-a
TCACCAAATCCCTCCAAGAAACCACCACCCCCACGTCGTCGCTCATTCGTCGTGGTTCGA
GCCGGTGGTCAAACCTACGAGCTCATCATCGACCTAACCACGAGCAAGATTGCATCCTCC
CGCATCTACACAGGCCATGGTTTCCCCTCA
GenBank Accession KG781106 [GenBank]
Graphic View Graphic view of gene At4g14940
Predicted Position of Insertion Chr4:8542089 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g14940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation amine oxidase 1
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g67420

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-5-26905778-R-150-a
TTAAAACAATTATATTAATTGATTACTGCAATTTTTATTCCACAATAAATTAGAAACGGA
TTTTTACACATTTTTTTAATAATAGTCTTTTTATTGGTTGGTAACGTTTGTGAAGTGACC
TTAGAGAGAGAGAGTGTGTGTGTGGTAAAA
GenBank Accession KG781108 [GenBank]
Graphic View Graphic view of gene At5g67420
Predicted Position of Insertion Chr5:26905778 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) K8K14
Hit Gene Code At5g67420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LOB domain-containing protein 37
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit KG781108 [GenBank]

Gene hit At3g28330

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-3-10586739-F-150-a
TTACACAATGGAGACATTGTGCTCCACAAGGATGTGGAACATAGCAGCGCGGGTCGCATT
CTGAATTCCGTTGATTGCCCGAGAGATATGACATACATCTTAGAATCAAACTTTGCCTCG
TTCGTTCTCCCACAGTGGATGCATCCGTTC
GenBank Accession KG781105 [GenBank]
Graphic View Graphic view of gene At3g28330
Predicted Position of Insertion Chr3:10586739 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) MZF16
Hit Gene Code At3g28330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein-like protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g43640

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-1-16441515-R-150-a
TTCCAACAATTGTTTTTCAAGAAATCAATGTCTTTTGACAACCGTACTAAACTTATTCTT
TTCTCTACCTCACTGAATTCCAAAGCTGAATATAACCTAAGATTTCAAGAACATAAACCT
AAGAAGATTTCAAGAACACAAACCTAAGAT
GenBank Accession KG781103 [GenBank]
Graphic View Graphic view of gene At1g43640
Predicted Position of Insertion Chr1:16441515 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) T10P12
Hit Gene Code At1g43640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tubby like protein 5
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit KG781103 [GenBank]

Gene hit T1B8

 
Sequence (A. th genome BLAST matches underlined) 
>087G10-LB-2-14300641-R-150-a
TTTTCGAATTTGTCAAAGACTGTAAGTACTAAATTGGGCTTGATGGGCTCTTCATTGGAC
TAACATAAATGTCTCGGACAAGTGTATGTGTTCTTCCTTGTACATTTTCACCTGCAACCT
TATCAGCCATAGCTATAGCATTCTGAAATA
GenBank Accession KG781104 [GenBank]
Graphic View Graphic view of sequence KG781104 of line 087G10
Predicted Position of Insertion Chr2:14300641 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) T1B8
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit KG781104 [GenBank]


Last Updated on 10.06.2021 13:37