SimpleSearch - Line and FST details


Line specific information

 
Line ID 089E07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At5g21960

 
Sequence (A. th genome BLAST matches underlined) 
>53-K016186-022-089-E07-8409
TTGTTTTCTCGTCTATTAGTTTTCTCATATAATCCTCTCTTTAAAAAATCAAATTGGCTA
TGGGATCCTCCCTATAGTGAGATATGGTCGCCACGTGGCGGTGACGGATGATGTTGTTCC
GGTGGTAGTAGCTCCTCCTCGCAGGCGAAACGGCTATGGGATCCTCCCTATAGTGAGACT
TTTGTCATATCTGTTTATGGGTANTCCATAAACGACGAACAATTATAAAA
GenBank Accession AL937840 [GenBank]
Graphic View Graphic view of gene At5g21960
Predicted Position of Insertion Chr5:7258789 - go to primer design
BLAST e Value 5e-34
Hit Clone Code (BAC ID) F13M11
Hit Gene Code At5g21960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 089E08

Gene hit At1g08765

 
Sequence (A. th genome BLAST matches underlined) 
>53-K016187-022-089-E07-8409
TGTCCTGTAGATTTCCCGGACTGAAGCCATTTACATTGAATCACTTGAATCATTAACTAC
ACATGTATATATCTATAATATCCTCGATCCAGACAACATTCCCCTCAACTGAAATAGCTT
AACCCTCGTGATAATCGATCTTAGCAGATTCACAAATTTTTGTTGTAGAGAGTGATAGAG
GAGAGAGAGAGAGAGGTTGGTGAATGGTGATGATGGTGTTATGATGAGGGAATGATGAGT
GGCGGATACGATTATGGGCTTTTAATAAGACACTAGCAGAAACAGGCCGTCATTCCTAAA
CCCTATGGGATCCTCCATTATGGAGAGAAGCAAGTGAACCAAGGCGTCTTCGCATCCCAA
CCCAGCTACACCTATGGGATCTCCCTTATAGTGAG
GenBank Accession AL937841 [GenBank]
Graphic View Graphic view of gene At1g08765
Predicted Position of Insertion Chr1:78967 - go to primer design
BLAST e Value 4e-59
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g08765 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status failed, line belongs to a contamination group, please check line 089D01


Last Updated on 10.06.2021 13:37