SimpleSearch - Line and FST details
Line specific information
Line ID | 101A02 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N409602) |
Segregation Analysis | 50:19:19 |
Confirmed for Hit | At1g08460 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g08460
Sequence (A. th genome BLAST matches underlined) | >09-012072-strizhov-A2-8409 GTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTAAAAAAAAATATATTCTTCGCTC TCATAAAATAAAGAAAATATAATGGAATTTATTTATGATTCATTTTCGTATAAAAAACAT TGGGCTACAAGTATCATGTACAAAACATTCGGCTATGGGATCCTCCCTATGGGGGGTCGA TTACTCANNNNNGGAGANNCACATCNNTCCACTTGCTTTGAAGACGTGGTTGGAACGTCT TCTTTGTCCACCATGCTCCTCGTGGGTGGGGGCCCATCTTTGGGACCACTGTCGGCAGAG GCATCTTCAACGATGGCCCTTCCTTTATCGCAATGATGGCATTTGGAGGAGCCACCTTCC TTTTCCACTATTCTCACACTAAAGTGACAGATAGCTGGGCCATGGAATCCGAGGAGGCTC CCGGGTATCCCCCTGGGACGAAAAGGCCCATCCGCCTTTTGGTCTTCTGAAACTGGATCA TTCGCCATCGTTAGTAAAAACCACGCGTGGCGGGCCTCACCCATGGTGACGAAGATTTTC TTCCT |
GenBank Accession | AL755682 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:2672221 - go to primer design |
BLAST e Value | 1e-47 |
Hit Clone Code (BAC ID) | T27G7 |
Hit Gene Code | At1g08460 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | histone deacetylase 8 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |