SimpleSearch - Line and FST details


Line specific information

 
Line ID 125A08
Vector Used pAC161
Line Availability only available from NASC (N411912)
Segregation Analysis 100:95:88
Confirmed for Hit At4g30020
Parent of DUPLO pair none
Parent of pair(s) 3970

Gene hit F28D10

 
Sequence (A. th genome BLAST matches underlined)
>57-K104604-0022-125-A08-8409
TTACCTCTACTTAGATACACATACACACATGGCGTCTACTTAGACCTAAACCTGTACTTC
TATGGGATCCTCCCTATAGTGAGTCGTATTACTCACGGCCCTAGGGGATCCTCCCAATAG
CTGAGA
GenBank Accession FR803564 [GenBank]
Graphic View Graphic view of sequence FR803564 of line 125A08
Predicted Position of Insertion Chr3:16378062 - go to primer design
BLAST e Value 6e-10
Hit Clone Code (BAC ID) F28D10
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g30020

 
Sequence (A. th genome BLAST matches underlined)
>57-K104603-0022-125-A08-8409
TTTTACTTCTACTCTGATACACATACACACATCGCTTCTACTTAGTACCTACACCTGTAC
ATTCTAGGGATCCTCCATATACTGAGTCTTTCTTTGCTGGTTCACCTTCCATCAAGAAAG
TTGCTGAAACTGCCAAGCATCTATGGGATCCTCCCTATAGTGAGTCNTNTTNNNCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNN
GenBank Accession FR803563 [GenBank]
Graphic View Graphic view of gene At4g30020
Predicted Position of Insertion Chr4:14680255 - go to primer design
BLAST e Value 1e-17
Hit Clone Code (BAC ID) F6G3
Hit Gene Code At4g30020 [TAIR] [MIPS] [SIGnAL]
Gene Annotation PA-domain containing subtilase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 14.10.2014 10:23