SimpleSearch - Line and FST details


Line specific information

 
Line ID 136D10
Vector Used pAC161
Line Availability only available from NASC (N413006)
Segregation Analysis 100:93:70
Confirmed for Hit At2g42300
Parent of DUPLO pair none
Parent of pair(s) 2455

Gene hit At2g42300

 
Sequence (A. th genome BLAST matches underlined)
>76-K012801-022-136-D10-35St
TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATAAAATTGGTGCCATCAGTGTCAC
ATAACCGTTTTTCTTCTTTTCAGATGCTATCTATGAGACTTGCTGCAGTAAACCCCAGAA
TCGACTTCAATCTATGGGATCCTCCCTATAGTGAGTCGTTTTACTCATNAATGTCCGCAG
CGCTCTTATAAAATGAAAGTACATTTTGATAAAACGACAGATTACGATCCGTCGTATTTA
TAGGCGAAAGCAATAAACAAATTATTCTAATTAAGAAATCTTTATTTCGACGTGTCTACA
TTCCCGTCCAAATGGGGGCTTAGATGAGAAACTTCACGATCGATGCCTTGATTTCGCCAT
TCCCACATACCCATTTCCTCTTCAGATTGGTCTGAGATTATGCCAAAATATACACTCATA
TACGTAAATACTGACAGTTGGAGCTACCAATTCAGTGCAGCCCATTACCTTACATAATTC
ACTCACATGCTATGGGATCCTCCCTATAGTGAGTCGTTTTTACTCAACGCGGNGTTTTAG
CCGCATAAAGTAGAATACTTGCGACTA
GenBank Accession AL765217 [GenBank]
Graphic View Graphic view of gene At2g42300
Predicted Position of Insertion Chr2:17623586 - go to primer design
BLAST e Value 1e-44
Hit Clone Code (BAC ID) MHK10
Hit Gene Code At2g42300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL765217 [GenBank]


Last Updated on 31.08.2016 09:40