SimpleSearch - Line and FST details


Line specific information

 
Line ID 143E09
Vector Used pAC161
Line Availability only available from NASC (N413689)
Segregation Analysis 50:23:15
Confirmed for Hit At1g59870
Parent of DUPLO pair none
Parent of pair(s) 1136, 4475, 4508, 4600, 10030, 73631, 73643, 73666, 73674, 73685, 73690, 73694, 73698, 73699

Gene hit At1g59870

 
Sequence (A. th genome BLAST matches underlined)
>69-K012977-022-143-E09-8409
NTGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACAATTGAATCCATGTAGATACA
GGAGTTTCCATGTTGGGACGAAGATGTCTAACGAACTTGCAGTACCGTTCGATAAGTCTC
GCGGCCACAAAGCAGCTCTTGTGTTCGATAAGTACTCTGTCTCAAAGAGGGAGCTTCTCA
AGAGCTGTTGGGACAAAGAGTGGCTGCTTATGCAGCGAAACGCGTTCTTCTATGTTTTCA
AGACTGTCCAGATCGTCATCATTGCTGCAATCACGTCTACACTCTTCCTGAGAACCGAAA
TGAACACAAGAAACGAGGGTGATGCTAATCTCTACATAGGAGCATTGCTATTTGGAATGA
TCATCAACATGTTTAATGGGTTTGCGGAGATGGCTATGATGGTTTCAAGACTCCCTGTGT
TCTACAAACAGAGGGATCTCTTGTTTTATCCATCCTGGACCTTCTCACTTCCCACTTTCT
TGCTTGGGATTCCAAGCTCAATATTAGAATCGACGGCTTGGATGGTGGTGACTTATTACT
CCATTGGTTTTGCACCTGACGCCAGCCGCTTCTTCAAGCAGTTTCTTCCTGGTGTTTCTG
ATTCAACAAATGGCTGCATCCCTCTTTTAGTTTGATTGCTTCTGTGTGCAAACCATGATG
ATTGCTAAACTGGNGGTGCTCTTACTCTACTTCTTGGTGTCTTGCTCGGAGGCTTCCTTC
TTCCGAAGGGCAAGATTCCTG
GenBank Accession AL765793 [GenBank]
Graphic View Graphic view of gene At1g59870
Predicted Position of Insertion Chr1:22036463 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F23H11
Hit Gene Code At1g59870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC-2 and Plant PDR ABC-type transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL765793 [GenBank]


Last Updated on 31.08.2016 09:40