SimpleSearch - Line and FST details
Line specific information
Line ID | 149H10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N414302) |
Segregation Analysis | 100:93:90 |
Confirmed for Hit | At2g05710 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g53830
Sequence (A. th genome BLAST matches underlined) | >80-K013397-022-149-H10-35St TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCGGTGATAGTTCTTGAGTTTCATTGGACTCAGAGAGAGAGAATCGATTA CGGGGATTTACGTTGTGCCACCTAGGATACCACGTCATCTTAGTGACACGTGGCGTGATC TATGGGATCCTGCCTATAGCTGAGTCCATTTACTCATAATTCGGAAGTCTTTGTTCGGAC GGGTCTACTTTCACGTCCGACTGGGGGCTTAGATGACAAACTACAAGACCGATGCCTTGA ATGCGACATTCCTAAACACACATTTCATCTTCAGATAGGTCTGAGATTATGCGAATACAT TCACTCATATACGTGGGTCCTGACAGTATGATCTACCAATCCAGCGTATGCCATTACCTT ACCTAATTCACTCTTCTGCTATGGGATGCTCCCTATAGTGAGTAATTTTACCTCTCCTTT TCATAAATGCCTGGCCGGTTGGACCTACCAATTCAGGGTAGCCCCTTTACGTAACATAAT TCACTCCAACGCTA |
GenBank Accession | AL757544 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:19940667 - go to primer design |
BLAST e Value | 6e-34 |
Hit Clone Code (BAC ID) | F5K20 |
Hit Gene Code | At3g53830 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Regulator of chromosome condensation (RCC1) family protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Gene hit At2g05710
Sequence (A. th genome BLAST matches underlined) | >80-K013072-022-149-H10-8409 TTGATCCATGTAGATTNTCCCGTACNTGAANGCCTTTACCAATTGAATATTGGGGAGCCT AAGCGTGTAAGAATAACCCACTGAAACTCATATATTGCATGAGATCACTCACCTTTTAAC CTAATCCTATGGGATCCTCCCTATAGTGAGTCTATTTACTCACTCAGATCATGTTCAAGA ACACCTGCTCTATTCAAATCTACTTGCACCATTAGAGTAACCAACTAATACATAAGAAAC ACAAACATCTTGCAGCTGAAGCCTAAAACCAATACAAGAATCTGATAAAACCAAACTGAA ACTTGTCATAAATTCCATATGAACCTGAGAGTAATCTCCTGTGTCTGAATGAAGTAACTT GCCAGCATCTTCTTCCATATGAACCCTATGGGATCCTCCCTATAGTGAGTCTTTTTACT |
GenBank Accession | AL757543 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:2146558 - go to primer design |
BLAST e Value | 1e-124 |
Hit Clone Code (BAC ID) | T3P4 |
Hit Gene Code | At2g05710 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |