SimpleSearch - Line and FST details
Line specific information
Line ID | 160G05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N415341) |
Segregation Analysis | 100:82:65 |
Confirmed for Hit | At5g20320 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g20320
Sequence (A. th genome BLAST matches underlined) | >39-K013243-022-160-G05-8409 NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATGTATCCTGCCTTG GGTGTAAAATGGAGCTTGGGGGAGAGCCTCCTTTGGATGACTGCATAGAGCTGCTACTTT CCTATGGCAGCCTAAGTATCTAGGATATTTAGGTTTTCAACGTCCAGCCCAACAAGATCC ACAACATCTATAGGATCTTCATTGTAGCCAATTAATTTAGCTTCATTTCGGATGCCATTC TTCAGAACATCCTCCAACGGATGGGAGGTTGTTATGTTCTCATGAGCCTGCGGATGAATT ACACAAAGAAGTTCTTGAACAACGAGTTACATATATGAACACTATGGGATCCTCCCTATA GTGATNNAGAGANNNNNANANNANNTTCGCGCCNNGGNNNCATTCGAGAATGCCGATGGT CCCCCCCTCCTAAAACAACCACCCCCCCGCGAGGCCTCCTGAGACCGCACCTTTGAGATG CGCCAAACGGCACAGCGCGGGCTGGCACACACCATTCTCCAAACAATTTTGTTTATAGAT CTTGGATCACCACAGGCTTCTGTAGAATGTGTTCGCCCCCGCTAGATAGCCGCAATGTGA AAGAACACATCATTTCAATTCTAGACCCCTCAGAACGCGGGGGCCCTCCACAATCCCATC CCCGATCCGCTCCACCCGAACCAGAGCGTGGTAATCGGGCGGGATGTTAGGGAGCCGACC CACTTGCTCCACGAAATTGGTTCGTTCTGCCGTGACGTTAACGACAGGGGGGAGGCGGAG CGAGTGGGACAACGGAGGGAGAGCAGCTCGAGGGCCGCCGGCTTTCCCGCGATCGACATC TTTCCGTGGTGGGGTAGTGAGCGATGTGCGGGTGCTGTGGAATTTATTGATATG |
GenBank Accession | AL758642 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:6860069 - go to primer design |
BLAST e Value | 3e-113 |
Hit Clone Code (BAC ID) | F5O24 |
Hit Gene Code | At5g20320 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | dicer-like 4 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |