SimpleSearch - Line and FST details


Line specific information

 
Line ID 179H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N417173)
Segregation Analysis 100:97:66
Confirmed for Hit At2g19190
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At4g26630

 
Sequence (A. th genome BLAST matches underlined) 
>08-K104550-0022-179-H01-8409
AATCTGAAGAATANAACTANGAAGAGGAAGAACCTGAGGAGGATAAGGCATACCAGAAAG
AAGAGACACACTAGGAGGATACTGATAATGGCATTCCTGATAAATCTGAGGATGAGGCCC
CTCAGCCTTCTGAAAGCGAGGAGAAAGATGAATCTGAGGATCATTCTGAAGAAGAAACTA
CTAAGAAGAAACGTGGTTCTTTGGGATCCTCCCTATAGTGAGAAGTTTCACTCTGGTTTA
TTGTTAACCACTCTCTTAAAAAAGCCACCTTTATATCCTCTTCTTTTTTTTTCTCCTCAC
ATTTAGCTTTCTTCTTCCCTCCTTCCTTTTTTTTTCCCTTCTCTTTTTTTTTTTATTTCT
CCCTCGCCCTTTTTTTCCACCTCTTTTTTTTTTTTTTTCCCCTTCCTTTTTTATTCTCTA
TTTTTCCCTTTTTTTTTTTTTATTTTTTTCTTAGTACACTTATTTTTTCACCTCCTTTTT
TTTCCCCCCCCCCCCTCTTTTGCTTCTTTTAACCTCTTACCCTCCTATTTTTATTTTATT
T
GenBank Accession FR805234 [GenBank]
Graphic View Graphic view of gene At4g26630
Predicted Position of Insertion Chr4:13432195 - go to primer design
BLAST e Value 1e-55
Hit Clone Code (BAC ID) T15N24
Hit Gene Code At4g26630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DEK domain-containing chromatin associated protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 179G02

Gene hit At2g19190

 
Sequence (A. th genome BLAST matches underlined) 
>08-K013563-022-179-H01-8409
NTGATCCATGTAGATTNTCCCGGACATGAGAGCACTTACAATTGAATAGTATCCTATACT
TACTTCTCTCCCAAGATATCATACCACCTGCTATGTGATACTACCTATAGTGAGACTCCA
TAAGGGACGTTCCCGAACCTTGCGCTGCATCTAATGATATCTTCAACCTCTCTTCCCAGC
TCAAGATAAATGACCTTTTACCTTCACAAAATGAAACAAAACCAAAGTTCCTTTCTCAGT
ACATTATGAACATAAGATTAGTGAACAAAAGAAGAATCATTAATTAACCTGCCAAATAGT
CTCCTAAGTTCTCATTAGCCATATACTCATAGATAAGCACCATGTGGTTTATTTCGTTGC
AATATCCAACAAGAGAAGTCAGGTTCGTGTGATGAACTCTCATGAGAAGGTCAACCTGCG
ATTCTCAGCTATGGGATCCTCCC
GenBank Accession BX546574 [GenBank]
Graphic View Graphic view of gene At2g19190
Predicted Position of Insertion Chr2:8326766 - go to primer design
BLAST e Value 1e-167
Hit Clone Code (BAC ID) T20K24
Hit Gene Code At2g19190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FLG22-induced receptor-like kinase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX546574 [GenBank]


Last Updated on 10.06.2021 13:37