SimpleSearch - Line and FST details


Line specific information

 
Line ID 181H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N417367)
Segregation Analysis 100:96:72
Confirmed for Hit At5g13790
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g13790

 
Sequence (A. th genome BLAST matches underlined) 
>24-K013603-022-181-H03-8409
NTTTGATCCATGTAGATTTCCCTGACATGAAGCACTAATATATAGTATGTCCTCATTCTC
TTGTACGGCTCTATTTAGTATGCTTAATAACCATTGACTGTACTCGTTACTTCCTTTATG
GTATTCTTCTTTTAGCAGAGTTTGGGGGAAAATGGGTCGTGGAAAAATCGAGATAAAGAG
GATCGAGAATGCGAATATCACACATGCCACTTTTTCCAAGAGGCGTTCTGGGTTACTTAA
GAAAGCTCGTGAGCTCTCTGCACTCTTCGATGCAGAAGTTCGGCGCATTATGTGCACTGA
GTATCGCCAGCCTTCCCAGACTTACATAAACTGCCCCACCCTGTATCTCCTCCCCGCCCC
CCTCCTATACCCCATTTTCTTCCCCTGCGTCGAATCAATATCTTCTCTCACCCTCTCCCC
CGTCCCTTCTTTTCCCCTTTCCCCCCCCCCCTCATTTTCCTCTTCTCCCGGACTTTTCGC
CCCCTTTTCCCCCGCCCCACCTCCACAACAAACCCCTCTCCATCCTATTTGAATCTGCCA
GTATCCCCCCTCCGATCCCCCCCGTTTTTCCCCTTCCATCCTCCCAGCCCACCCACCCCC
CTCCCCCCTCCCTCCCCGTCCTCACTACCACAATCCTCCCTTCATATCCCCCGCTCCTCC
CCCTGCACTCTCTTCTTCGCCCCCCCCCGCCCCTTTCCCCCCCTCCCCTCCCTCCCCCGC
CCTCTCTCCTCCTCCTTATGTCCATTCCGCTCCGCCCCCTCCCCTATTTTCCCCCTTCTT
TCCTCCCCTATTCTCCACCCTCACCCCGCCTTTTGCCCCCCGCCGCATCATTTTTCTTTT
ATGTTTATT
GenBank Accession AL771630 [GenBank]
Graphic View Graphic view of gene At5g13790
Predicted Position of Insertion Chr5:4450895 - go to primer design
BLAST e Value 7e-52
Hit Clone Code (BAC ID) MXE10
Hit Gene Code At5g13790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AGAMOUS-like 15
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR805281 [GenBank]


Last Updated on 10.06.2021 13:37