SimpleSearch - Line and FST details
Line specific information
Line ID | 185D07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N417707) |
Segregation Analysis | 100:88:61 |
Confirmed for Hit | At3g21270 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g23325
Sequence (A. th genome BLAST matches underlined) | >52-K013652-022-185-D07-8409 AGTATTTCGGAAGTTCACGTTTTTTTTATCCAAATTTAAAAGTTAATGATTTGGTTTGAT TGAAATGTCCGGTTCTGGACGGGTTTTCTTTTGTACCGGTTCTCATAATAATAGCCACGT ATTAAAAGTTTATTAGGTAATGGATTTGGGCCAGACCCATTCTCAAAGCCCAATCAATTT CTCAGTGAACCATATATAAACCTAATTAACGTGAAGCAGAAGTCGTATCCTTCTTCTTGC GAACTCGCTGAAGCTCTGAAAGATGCAGGTTTGTCTCTCTCGATTCGAAACCCTATGGGA TCCTCCCTA |
GenBank Accession | AL772010 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:8345560 - go to primer design |
BLAST e Value | 6e-120 |
Hit Clone Code (BAC ID) | MLM24 |
Hit Gene Code | At3g23325 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Splicing factor 3B subunit 5/RDS3 complex subunit 10 |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Gene hit At3g21270
Sequence (A. th genome BLAST matches underlined) | >52-K013650-022-185-D07-8409 CTGATCCATGGTAGATTTCCCGGACATGAAGTCACTTTCTGTTGATTACTTAGAACCAAA CCTGTTTTATATTGTGGATGGTTGACTTGAGGGTGATTCTTGATTTGGTTCAGTGTGTTT GAGGAGACAATGATACCGAACTTTTTTTATCTGCGTACTTTTCTGCACCACATGGAAAAC ACGCATTGGTACTTGGGTGATGATAAGGATATCATGGTTACACCAGGGCCTAGCCCGAGG TCAATGTGCAAAGCAACCAACGAGTACCCATGGGAACAAAATAACGCTATTCCGACCCGC TATGGGATTCTACCTATAGAGAGACGAGCTAAAGCTTCCACCAATCTCCATACCCTTCAC GTGTTGGTCACCGATCGGAAACCCGTATAGCATCCGGGTCGGATCCAAATCCGGTTTTTG AGAATTACGTGGATCAGGATCCGGATCCGGGTTTTTCGTCTTCTTGTTTTGGCTACTGGT GGAAGGAGAGGAACCACAAGAAGAAGAAGAAGTGGATCGTTTGGTTGCGTTCTTACCACA CCACCACCGACGG |
GenBank Accession | BX546578 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:7475646 - go to primer design |
BLAST e Value | 3e-106 |
Hit Clone Code (BAC ID) | MXL8 |
Hit Gene Code | At3g21270 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | DOF zinc finger protein 2 |
Insertion Classification | TS2TE (3') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |