SimpleSearch - Line and FST details


Line specific information

 
Line ID 200A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N419106)
Segregation Analysis 50:21:14
Confirmed for Hit At3g52750
Parent of DUPLO pair none
Parent of pair(s) 2988
Note

Gene hit At3g52750

 
Sequence (A. th genome BLAST matches underlined)
>09-K014483-022-200-A02-8409
TTTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGAGATA
GTCAAGCCATTTCCAAAGCCAAGACTCTTTCTTGAATCTCCACCCTGAGATATCCATGCT
CAACCCAAGAAAAGAAACTTCCAGTGTTCCCATTACTGAGGATTTGGATGAGTTATCTAC
TCCAAACACTTACAATGAGGCTTATGGGATCCTCCCATAAAGTGAG
GenBank Accession AL760608 [GenBank]
Graphic View Graphic view of gene At3g52750
Predicted Position of Insertion Chr3:19552234 - go to primer design
BLAST e Value 2e-73
Hit Clone Code (BAC ID) F3C22
Hit Gene Code At3g52750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tubulin/FtsZ family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g01190

 
Sequence (A. th genome BLAST matches underlined)
>09-K014487-022-200-A02-8409
TGATCCATGTCGATTTCCCGGACATGAAGCCCTTTACTTTTGATTACTTTCGGCGATAGT
ACTAGTCTCGTTGACACATGCAAGACTCTCTCTTGAATCTCCAGCCTGAAATATCCATGC
TCAGAGCCACACAGAAAAGAAACGTTTCAGTGATCCCATAACTGAAGATCTGGATGAGAT
ATCTACTGCAAACACTTACAATGAGACTATGGGATCTCTTTTGTCACGGAAAGATGACAC
GTCACCACCACCTTAATCTCACCGAGGCTACACGCCATGACCCGCTTGGCGTTACTCATC
TCAGCCACAGACGCTATGCCCTGATGAGCCACGTGGCTTGACCTAAGGCTCATGCTCCCC
A
GenBank Accession AL760609 [GenBank]
Graphic View Graphic view of gene At1g01190
Predicted Position of Insertion Chr1:84315 - go to primer design
BLAST e Value 3e-54
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g01190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 78, subfamily A, polypeptide 8
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 100H01


Last Updated on 10.06.2021 13:37