SimpleSearch - Line and FST details
Line specific information
Line ID | 207D11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N419823) |
Segregation Analysis | 100:80:51 |
Confirmed for Hit | At1g60220 |
Parent of DUPLO pair | 2303 |
Parent of pair(s) | none |
Gene hit At1g60220
Sequence (A. th genome BLAST matches underlined) | >84-K014550-022-207-D11-8409 TTGATCCATGTAGATATCCCNGCACATGAAGTCCTCTATATTGCAAATTTACATGAAGTC AGGCTATGGAATCGCTGCCCTATAGATGAGATTGTGGCAAACCTCCCTGTAACTGTTTTT TTTACTATCTCCTACGGCAGCAGGGCTTGGAAAAACTGGCGATACTGACTTCGGACTCCC CCTAAAACGGTGGGATTGCCGGATTACGGAGCAACTTTCGCTAGAGATGCCTGGGCTCGC GCGTGACCGAGTTGGTATCCTCCCTATTCAGTGTGTCCTCTGATTCCTATAGTTTTTTTA GGGAATATCATCAATAAGTAAGAAAAACAACATAACAAATGAGTTGGAGTAAAGACAATA TTAAAGAAGCCAAATAAATGATCTAGTCAAGTGGGAAGTTTTCCTGGCAAGCTATAAATC CTGCAGTTCATCTATGGGATCCTCC |
GenBank Accession | BX942886 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:22210443 - go to primer design |
BLAST e Value | 1e-62 |
Hit Clone Code (BAC ID) | T13D8 |
Hit Gene Code | At1g60220 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | UB-like protease 1D |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At5g12880
Sequence (A. th genome BLAST matches underlined) | >84-K014553-022-207-D11-8409 TGATCCATGTAGATTTCCCGGCCGTTTAGTCCTTCTATTTGCAAATTTATCTTTTTGTCA GCCTATAGTATCCTCCCTTTTTGCTATGGAATCTAACAACACGGCAACTTTTTTTTTTAA TTATCTCCTTTGGGATCCTCCCTTTAGT |
GenBank Accession | AL761312 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:4069068 - go to primer design |
BLAST e Value | 4e-04 |
Hit Clone Code (BAC ID) | T24H18 |
Hit Gene Code | At5g12880 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | proline-rich family protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |