SimpleSearch - Line and FST details
Line specific information
Line ID | 227G05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N421773) |
Segregation Analysis | 100:91:84 |
Confirmed for Hit | At5g43290 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g63290
Sequence (A. th genome BLAST matches underlined) | >39-K014262-022-227-G05-8409 ATTATTAAAAGAGTATTTTGAACGCGCCCCCCTCCCGATTATACCAGCTATTAACCTGGG GCACGGCTATCTATTAGATTGCAGACCATTCCCTCCGTAGTACTGCTTTGTCGTTTGACG TGAGAACTCGGCACAAATCATCCCATCCCTT |
GenBank Accession | FR806132 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:23383433 - go to primer design |
BLAST e Value | 9e-42 |
Hit Clone Code (BAC ID) | F16M2 |
Hit Gene Code | At3g63290 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Gene hit At5g43290
Sequence (A. th genome BLAST matches underlined) | >39-K014266-022-227-G05-8409 CTGATCCATGTAGATTATCCCGGACATGAANGCCTTTACAATTGAATATATTCAATCCTG ACAGTACTTTGAGCAGCGAGGATAGGTACACTTCTAAAGGTGAAGAACAATAGTACTGGA ACTGTGTGATGATGGACTACAAACGGAGACAATATGGCCAAAAATCACTCAAAAATAGCC CTAACCCACGGTACATATGTGCATTCTGCAGATTAGAATAGTGTATGCATATCGAACTTC TTTGGATCGGCCAAAATGATACGTCTTAAAATCAACATATGGAAGTCCTATTTATTATAC TTAGCTATCGGCTCACAAGCCTAATGTTACTATATTTGTGATATATGCCTATGGGATCCT TCCTTTAACGAGTATTTTGAATTTAACTACCTAAAGATTAGACAAGCTATTAACCTGGCG CACGGCTATCTATCAGATTGCAAACCATTCCCTCCGTAGGACTGCTGTGTCGCTTCACGT GAAAACTCGGCAAAAGTCATCCCATCCCTTAACCCCGACGATAGAGGTGCAACCATATTC TGGTAATCTGG |
GenBank Accession | BX649789 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:17372700 - go to primer design |
BLAST e Value | 3e-88 |
Hit Clone Code (BAC ID) | MNL12 |
Hit Gene Code | At5g43290 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | WRKY DNA-binding protein 49 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |