SimpleSearch - Line and FST details


Line specific information

 
Line ID 243B11
Vector Used pAC161
Line Availability only available from NASC (N423255)
Segregation Analysis 100:77:57
Confirmed for Hit At5g45300
Parent of DUPLO pair 7972
Parent of pair(s) none

Gene hit At5g45300

 
Sequence (A. th genome BLAST matches underlined)
>82-K014389-022-243-B11-8409
TGATCCATGTAGATTTCCCGGACATGAAGCACTTACAATTGAATATATCCTTTCTGGATA
TGCTGGCTTAAACCTTCTGGAATCACTCATGCTTCTTCATGCGCATTGGGAGACATTTGT
GGCCCAGGGCACACAAACTTCACAGTCACGGAATATTTCTTCAGAGTTTCGAAAACAAGA
GAGTACCCATCACGGTTTGAAGGGTTGTAGTATCCTGCAGTTAATTCAGCAGCATGGCTA
TGGGATCCTCCCTTATTTGTGANNNNNNNNNNNNNNNNNNCCNTCTNTNNCNGGGGGGGG
GGGGGGNNNNACCCCCCCCCCTTCATAAACTCAACCAGATGTCTCCGCTGAGATTGAGGG
GAAAAAAAAAAAAAAAAAAGCCGCGTGCCCGGGGGGTGTCCCCTACCCATCACCCCTATG
TTGAGCTCCCGACGCCGCGACCCCACCCCCGTCCGGCCGGGATCCAAGGAGACACGCCCC
AACCAGTGTGCGGGGCGCCGCCGCCATTTTGTCGACCGGGTCCGTGGGACCCGACCCGCG
GAAGCCGTGGGTACAGCGCACCCCCGTGCGGCTCACTTTTATCCCCGACAGGCGACCCGA
TTTTTTCCGAATCACCCACAAGGCACGTCTCCTCAACCCGTTTAAACCCCCGGTTCCGGC
AGGCGCCTCACCCGCGCCACCCCGAAAAAACAACCCGCGACCACCTGCTCTCCCACCACC
CAA
GenBank Accession BX649797 [GenBank]
Graphic View Graphic view of gene At5g45300
Predicted Position of Insertion Chr5:18356274 - go to primer design
BLAST e Value 6e-80
Hit Clone Code (BAC ID) K9E15
Hit Gene Code At5g45300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-amylase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 07.07.2016 14:03