SimpleSearch - Line and FST details
Line specific information
Line ID | 263B01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N425165) |
Segregation Analysis | 24:19:14 |
Confirmed for Hit | At2g46270 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g06490
Sequence (A. th genome BLAST matches underlined) | >02-K014927-022-263-B01-8409 TTCTGATCCATGGTAGATTTCCCGGACATGAAGCCCTTTACATGATGGTAATGTCGTATG GCTTTGTTTTGTTTGGTATACGGTGATTTTAAATATATTAACAAATAGCTAACCAGTGGA GTCGATTAACGCGCTTTTACAGATACTTCAAATTATTGTCTAAGACTTAATCGATCATTT AAAGAGGCTATGGGATCCTCCCTTTAGTGAGATAAAAGGGTACTACTGGACGCTCTCTCT GCAGCTCTTGATCCCCGAGTATGATTCAGGCGAAACCTTGTCCAAACATCTCCCCGAAGA TGAGAGCGTTAGCCTAACTCCTCGTCAGCGTTTAAACACCATTCCATCTTACTCTCTCTC TAAAAAGACCAGAGCGAAAAAGAGTTCATTTCTTTTTTTTGGGGGAAGGGAAACCCAAAA AAAAAAAAAAAAAAACGGAGCCCCAAAACAATAACCCCGTCTTCAAACC |
GenBank Accession | AL942072 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:1978722 - go to primer design |
BLAST e Value | 7e-49 |
Hit Clone Code (BAC ID) | MHF15 |
Hit Gene Code | At5g06490 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Gene hit At2g46270
Sequence (A. th genome BLAST matches underlined) | >02-K014952-022-263-B01-8409 TTGATCCATGGTAGATTTCCCGGACCATGAAGCCTTTACAATAGAGTATATCCTGAACGT CTGAGTGTTGGAGAGCAAATACGATGATACCCTTCTATGTCCCTATAGTTCTCACCAGCA GCTCCCATCCCGCATGATACATGTATAAAGAGTCATTGATATATTGAGTGGGAAACCTTG AGACCCTTCCTATGGGAAATAGCAGCGAGGAACCAAAGCCTCCTACCAAATCAGATAAAC CATCTTCACCCCCGGTGGTATGTTGAACAGTTTCAAACCATAATTCCAAAGTCAATTTAG TTTTTCTTAAATTCCTTATGCGTTGACTTGACTCTTGTTGATAGGATCAAACAAATGTTC ATGTCTACCCTGATTGGGCAGCTATGCAGGTTAGTCTTTTTTTTATTACGCTCCAGTTAT GCACTATGGGATCCTCCCT |
GenBank Accession | AL942073 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:19000726 - go to primer design |
BLAST e Value | 3e-128 |
Hit Clone Code (BAC ID) | T3F17 |
Hit Gene Code | At2g46270 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | G-box binding factor 3 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |