SimpleSearch - Line and FST details
Line specific information
| Line ID | 267D01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N425573) |
| Segregation Analysis | 50:32:21 |
| Confirmed for Hit | At1g32340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g32340
| Sequence (A. th genome BLAST matches underlined) | >04-K014992-022-267-D01-8409 TTTTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAAGACCATTCTATA ATCATGGGCTCTATATGCTATGGGATCCTCCCTATATGTAGAGAGGGCCAACATATCGCT GATACCTGCCGTATCAAGCATAAGGACCCTGAATCCATTCTTGTTATTTAATACGCGCAT TTTTACTCGAATTATCTTCTACCATAACTCTTACCGCTACCTTTCATACTGTCCATTACC AATACCATACTACACAACCTTCACAGCCTCACGCGGAGTCGACGCCTACGACGATCAAAT TCTAAACCTCATTCCAACGACAAACCGGAGCGTAAATGGGATCCCTCCATGGNNGAGGAT NGCTTGGCTGATGAATTGAGTAGGTTAAAGGTGAAACAGAATTCCCATTCGGTGAATTTG GAGGAGAAAGT |
| GenBank Accession | AL942580 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:11666039 - go to primer design |
| BLAST e Value | 1e-25 |
| Hit Clone Code (BAC ID) | F5D14 |
| Hit Gene Code | At1g32340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NDR1/HIN1-like 8 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F9L11
| Sequence (A. th genome BLAST matches underlined) | >04-K015000-022-267-D01-8409 TTTTTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATATATGGAATA TATATCCTTTACTTTATGTTAATTATTTTTACCAAGCAAACAAATGGCCTAATTTTGGTT GAGTTTATTTGTTTTCCTAACGAAGCAAATGACCTAATCGACACCAAAAGAAACCAAACA AAAGTCTATTTAGACTATAGTCTATAGATTTTTTTAATATATATATTTATCAAAGCGGAT ATCCGCAAATATTTAAAAAAAAAATCCGGATATTCTAAATTCCGGATATTATAAAATTTT CAAACTCAAGCAATTATAAAATCAAGTTTTCGGGTAAAACGATTCGATTATCAAATATTT TAATTTTTTGGGATTTTCGCTTCGTGCCCAAACCTATGGG |
| GenBank Accession | AL942581 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:11930463 - go to primer design |
| BLAST e Value | 8e-101 |
| Hit Clone Code (BAC ID) | F9L11 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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