SimpleSearch - Line and FST details
Line specific information
Line ID | 278B08 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N426612) |
Segregation Analysis | 100:98:80 |
Confirmed for Hit | At5g65510 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g65510
Sequence (A. th genome BLAST matches underlined) | >58-K015156-022-278-B08-8409 TGATCCATGTAGATTTCCCGGACATGAAGCCCTTTAATAGGATTATATAACGTGCATCTT CTTGCCTGTCCCACTGTAATGAGAGATGTCAGACTGTATTTACGGCGGTAATAAATACAA AGATCCTTGCTGGATCATTTCGCAGAGAGTACTAACCCCTCCTATGTATTTACTTCATTC TATGCGTATTATTGTTAGTCCTTTCTGTTTAAAATCGGGGTCTTTCCTTGACATTATGCC CATATACCTTAGGCTATCAATCATCATGAAGAGTATACATATCACCTAGGAGGAAGGACT TTTCAGCTGTTCATATGTATTGAATCCATTGCATGCATTGCTCTTGGCACTCTTTCTTTG ACAAAACCTTTGTACTGCTTCCGCTTTTGTTTTCCCCAACCATAAAAGTTAAAGAATAAA TGTTTGTTTTTAACCCAAGTCAAACTATGGGATCCTGCCTTGAGCGAGC |
GenBank Accession | BX890932 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:26187819 - go to primer design |
BLAST e Value | 1e-99 |
Hit Clone Code (BAC ID) | K19O4 |
Hit Gene Code | At5g65510 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | AINTEGUMENTA-like 7 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At3g10010
Sequence (A. th genome BLAST matches underlined) | >58-K015122-022-278-B08-8409 TTGATCCATGGTAGATTTCCCGGACATGAATGCCTTTAGCATGGGACTATATCACTAGAC TTCTCGCCTCTGCAAACTGTAAAAAAAGATAATCAAACAGTTTTTAAGGCGGGAATAAGT AGAAAAATTCTTGCTAAATCATTTTGCAAGAGTTACTAACCCCTTCTATGGGATCCTCCC TATCATGAGAGGCCGGGAAGTACATTGATGCGCCAAAACGATGATGTGCGGTATTTGAGA GCGAGTGTACCTTATGCGACGAGGTGCGTTGGAGAGCATGCATGCCGACGCGGGAAGAGG AGTCGGAGACTGTCCGAGGAACTGTATGGGTAGGATGCTGGTGGACAATTACCAGGAGAA TAGCTCTAAGTAGAAATATGAGGACGGTATCAAAATGACTAATGTGATTGGTAACAGATA CCTTGCAGAGCAGCAATGAGAGGTGGATTCCCTGTGAATGGCACATACTTCCAAACTAAT GAGGTGATTTTCCCAGGAATGAATTTAACTTAAGCAGATGATCAAAAGCACCATTCTCGT CAAAGCTCGATTGGGACTATACTTGTGCAGG |
GenBank Accession | AL943938 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:3083083 - go to primer design |
BLAST e Value | 5e-93 |
Hit Clone Code (BAC ID) | T22K18 |
Hit Gene Code | At3g10010 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | demeter-like 2 |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |