SimpleSearch - Line and FST details


Line specific information

 
Line ID 284H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N427263)
Segregation Analysis 100:98:79
Confirmed for Hit At5g46830
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g46830

 
Sequence (A. th genome BLAST matches underlined) 
>88-K015276-022-284-H11-8409
NTGATCCATGTAGATTNTCCCGGACATGAAGACACTTACAATTGAATATACTCCTGAAAA
TCGCGGTAAGAATATTCGGGTTGTCGGAATAGGATTAAGAACAACTGCTCTCTAACTGAA
ATGGGAAAAGCTCCGAGTTCGAATTCGGGGCTCCAGAAAAATATTTGGATCCTCCAAAAA
GAAACCGGATCCTATTAAAAAGATCCGAATTTGGTCGGATCTCCTCCGTGGATGCAAGCT
CCAACACTCCGTTATGTGAAGGAATACACAAGATGGTCTGTAACCCTACATCCCCTCCTT
GTTTAGCCCGATCACAACCCGACCCGTAAATCAGATCCGAACCGGTAACCAAAACCGGGT
TATAGCTATGGGATCCTCC
GenBank Accession BX890936 [GenBank]
Graphic View Graphic view of gene At5g46830
Predicted Position of Insertion Chr5:19003510 - go to primer design
BLAST e Value 6e-151
Hit Clone Code (BAC ID) MZA15
Hit Gene Code At5g46830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation calcium-binding transcription factor NIG1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37