SimpleSearch - Line and FST details
Line specific information
Line ID | 302G09 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N428977) |
Segregation Analysis | 100:89:70 |
Confirmed for Hit | At1g76420 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g76420
Sequence (A. th genome BLAST matches underlined) | >71-K015559-022-302-G09-8409 NTTTTGATCCATGTAGCATTTCCCGGACATGGAAGCCTTTACAATTGAATATATCGATGC TTCGGTTTGACTACTAATAACTGTGTTTTTTTGGTTGGCGCCAAAAAAGTGTAATAGAAG ATTCAAATGGAATACTTTGTACTTAGAAACCTTTTTAACTTTCACATTTTAACTTCTACA AAGAGTACTACGGGGATCCTCGCATCTAGTGAGGGTTCCCAATGTGCGGGTTCCGGTTCC CAATGTACGGTTTTGGGTTCCCGATGTACGTGCTATCCACAGGAGAGAGACCTTTCCGAC CTTCGTTCCCCTGCTATGGGACCCTCCCTATCTGCTGAGGCGNGCGTCTCACTCTCACTC GTGCATCTCTGTCTTTAAAAAAATTTGTATTTTTTCTCTTGTCAATTTATGAGTTGACTG TTTGAAACCAAAAATTTTATACTACTATGGGATCCTCCC |
GenBank Accession | AL947248 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:28673478 - go to primer design |
BLAST e Value | 1e-34 |
Hit Clone Code (BAC ID) | F15M4 |
Hit Gene Code | At1g76420 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit F28K19
Sequence (A. th genome BLAST matches underlined) | >71-K015559-022-302-G09-8409 NTTTTGATCCATGTAGCATTTCCCGGACATGGAAGCCTTTACAATTGAATATATCGATGC TTCGGTTTGACTACTAATAACTGTGTTTTTTTGGTTGGCGCCAAAAAAGTGTAATAGAAG ATTCAAATGGAATACTTTGTACTTAGAAACCTTTTTAACTTTCACATTTTAACTTCTACA AAGAGTACTACGGGGATCCTCGCATCTAGTGAGGGTTCCCAATGTGCGGGTTCCGGTTCC CAATGTACGGTTTTGGGTTCCCGATGTACGTGCTATCCACAGGAGAGAGACCTTTCCGAC CTTCGTTCCCCTGCTATGGGACCCTCCCTATCTGCTGAGGCGNGCGTCTCACTCTCACTC GTGCATCTCTGTCTTTAAAAAAATTTGTATTTTTTCTCTTGTCAATTTATGAGTTGACTG TTTGAAACCAAAAATTTTATACTACTATGGGATCCTCCC |
GenBank Accession | AL947248 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:29276941 - go to primer design |
BLAST e Value | 6e-37 |
Hit Clone Code (BAC ID) | F28K19 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |