SimpleSearch - Line and FST details
Line specific information
| Line ID | 314G10 |
| Vector Used | pAC161 |
| Line Availability | available as unconfirmed T2 stock from NASC (N2108721) |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
| Note | |
Gene hit At5g06530
| Sequence (A. th genome BLAST matches underlined) | >314G10-LB-5-1991744-R-150-a GGTGGAATCTAAACCAGAGGTTGGTTCATCAAGAAGTAATAGAGAAGGATTAATGATGAT CTCGTTTCCAATAGAAACTCTTTTCCTCTCTCCACCTGATACACCACGCACGAATGCTCC ACCAATCATAGTGTCTTGGCATCTGCAACC |
| GenBank Accession | KG783806 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:1991744 - go to primer design |
| BLAST e Value | 3e-80 |
| Hit Clone Code (BAC ID) | F15M7 |
| Hit Gene Code | At5g06530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ABC-2 type transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At1g60460
| Sequence (A. th genome BLAST matches underlined) | >79-K015819-022-314-G10-8409 TGATCTGTAATTTACCGGACATGAAGCCTTTACCTTGAATATATCCTGTAACAATACGCT CGGTTATTATGACATGCCCAGTGGGACCTATCGATTCTCATGTATTCCATTACCTTACTT GAATTCAATATCATGCTATGGGATCCTCTGCATGATTCGAGATCGCGTACGGGTACAGGT ATTGCCTCGATAGATTCGTATCCAAGACTTGTATCATTTGATGATGCCATGTGAATCGCT ATGGGATCCTCCCTATAGTGAGATGGAGGAAGAACAATAACAAGTTACTTAGTTTCGGTG ACTCGAACTTAATGTACACAACTAACAATCAATCATATAACCCAGAGAGGAAAACAAGAT ATGTTTCTCCATTGGACTTACAAGCAAAACCAGGAAAAAGGCTAAAGCATTTAAAACCAT AAGCAAGATTTGAGGTCAATATAGCAAAACTTACAAGTCGTTTTGACGGAGAGTAACCCA TCTGCAACACATCATTATCCACAGTCAGAATCGCATTAACGTATTACAAAGATAACAGAG AAGCGAACCAATTCAGCTCAATTTGTACAATTCTAATTACACTAAAATTTTCTAGTTAAC ATTCAATAATCGAATACTGAAAATGCTA |
| GenBank Accession | AL948725 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:22276620 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F8A5 |
| Hit Gene Code | At1g60460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 314G09 |
Gene hit At1g01120
| Sequence (A. th genome BLAST matches underlined) | >79-K015823-022-314-G10-8409 TCCCTATAGTGAGATACGTTCTCTGAGCTTTGGTCTAACCAGGCGGTTCAACTCGACACG GCGACGAGACTTACCTGCTTGGTTTTCCTCTCCTTCGTTTTGACCCTCTACGTGGCTAAC CGGTCTAAACCGGTTTACCTATGGGATCCTCCCTATAGTGAGANCNCTGCCGACCGGTTG ATCCTCGATCCGGGGATGGGATTTTTCTTGAGCCCCGCGCCGTTAAGATAGCTGCACGTG CTGTNAACCCCTTCAGAGCTGGACGGCTNCGCTGGGGCTTCCGNCATTGGCCTCGGTGTC GCGAAAACCGCTCCCCGGACCCCGCCGCTGGCCCTTCCTGGAGAAGATCTGGGTGCCGGC GAG |
| GenBank Accession | AL948726 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:58775 - go to primer design |
| BLAST e Value | 8e-67 |
| Hit Clone Code (BAC ID) | T25K16 |
| Hit Gene Code | At1g01120 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 3-ketoacyl-CoA synthase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 312G10 |
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Last Updated on 10.06.2021 13:37 |
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