SimpleSearch - Line and FST details
Line specific information
Line ID | 318D10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N430478) |
Segregation Analysis | 100:92:64 |
Confirmed for Hit | F14G6 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Note |
Gene hit F14G6
Sequence (A. th genome BLAST matches underlined) | >76-K015859-022-318-D10-8409 TGTCCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATCTTCAATCCATATCTCTCG TTACTGCTATTGCGCTATTCGCTGTATGCCTAATATCATCTACTGTTTCAGTTTCGTCTA TCTGAACTGACCCTAGTGGTATACTCCCCATAGAGAGATCACATTTTGACGAATAAAGAG ATTAATGTTATCCTTTACAAAATAATGAAATAAGAAAGAAACAGAAGTTTATGTTTGTCC AATTATCCTCAATGTTTGTTGATATACGAATTTTGAGAATTCAAACTGAATACAAGAAAT AAAAATGTAGTGAGATAATAATACAAATTTGCATTATTTCTTCCAAGATTGTTTTCTTTA AGTAAATGAAAAGTATCTTGGATTATTACAGAAATGACCCTAAATCTTTTTGAATTTACA GTTTGTACCACCACCGAATAAAATAAGAAAAAGTTTCGTTAAATGTTACGAGTGCTCGTT GAAGACGAAGTTTCGAAGACGACCAACAAAGAGAAAGATCAAATTTTGAGAGGGAAACTA AAAAGAGGAAGAGAGAAGAAGAAGAAGAAAACCCCCTTGATTAATAAAGTCTCAGACTTT TTTGATCCATTCCAAAAAAGGGAGTTTATGCCTTGAAGCTGGGAAATCCAAAAATCCGGA ATTCGTGTAAAACTA |
GenBank Accession | AL949149 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:28733798 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F14G6 |
Insertion Classification | Genome Hit |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At2g47640
Sequence (A. th genome BLAST matches underlined) | >76-K015855-022-318-D10-8409 CTCTCCTCCCTATATTCCAGTAATTCATCTACTGTTTCCAGTTTCATCAATCTTAGCTGT CTCTATGGGATCCTCCCTATAGTAGAGAAANANNNNGACGAATNNCCAGATTATTGNTAT CCTTTACAAAATAATGAACCCACCCCGAAACAGAAGTTTATGTTCGTCCAATCATCCTCA CTGTTTGCTGATATACGA |
GenBank Accession | AL949148 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:19537552 - go to primer design |
BLAST e Value | 1e-16 |
Hit Clone Code (BAC ID) | T30B22 |
Hit Gene Code | At2g47640 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Small nuclear ribonucleoprotein family protein |
Insertion Classification | CDSi |
Confirmation Status | failed, line belongs to a contamination group, please check line 318E10 |
Last Updated on 10.06.2021 13:37 |