SimpleSearch - Line and FST details


Line specific information

 
Line ID 338A01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit MRG7

 
Sequence (A. th genome BLAST matches underlined) 
>01-K016159-022-338-A01-8409
GATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAAAATTTCCATGTATGGTTG
AAATTGCTTTTTCAAATAGATGTTGCTCGTACAATATTCTGCCATGAAGAACCCGATGTT
CTACCAAATAATCATTAATTTGTTGATCTAACAAGAATTTACATTAAGCCAAACATAATC
ATTCATAACAATCGATATGACAAATAACTAACTCTTTTACATATGACATTGACAATTTTC
TATGGGATCCTCCCCTATAGTGAGA
GenBank Accession AL951688 [GenBank]
Graphic View Graphic view of sequence AL951688 of line 338A01
Predicted Position of Insertion Chr5:6001370 - go to primer design
BLAST e Value 4e-112
Hit Clone Code (BAC ID) MRG7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g01120

 
Sequence (A. th genome BLAST matches underlined) 
>01-K016137-022-338-A01-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATAAGCCATTTTTGGTAATTGT
ATACTCATTTGGGATTTTGGTGAAATGAGGGCAAGTAGGGATGGAGAGATATATAGAGTG
CAAGAAAGATAAAAATATTTTAAAGATTAATAATAGTAATGACTTAACAAAAAAAAAAAA
AAGGGGAAATATTTCCAAATTTTAGGGGGGGGGGGCCCCAAAAAAAAATTTTGCCCCCCC
CCCTTTATGGGGCCCTTTATTTTAAATTAAAGAGCCAAATTTTTTTCCCGGGTTTGGTCC
CCCAAAAGGGAAGTTAAAAAAGGCCAACCAAACCCTTGGGG
GenBank Accession AL951687 [GenBank]
Graphic View Graphic view of gene At1g01120
Predicted Position of Insertion Chr1:59105 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g01120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 3-ketoacyl-CoA synthase 1
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37